Pairwise Alignments

Query, 404 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 403 a.a., ABC-type antimicrobial peptide transport system, permease component from Dechlorosoma suillum PS

 Score =  126 bits (317), Expect = 1e-33
 Identities = 111/398 (27%), Positives = 186/398 (46%), Gaps = 29/398 (7%)

Query: 17  LKSVLAITAISWGVISVVILMALGEGFYRAQTESFRFL------LQETQMVASGQTSEVW 70
           ++S L +  I  GV +V+ ++ LG G  R   E    L      L+  Q +  G+ S   
Sbjct: 18  MRSFLTVLGIVIGVAAVITMVTLGNGATRMVAEQISSLGSNLLILRPGQRLGPGRDSA-- 75

Query: 71  QGMPARRPIQLTESLMREVAQRPEIQRYSIVYENREVSITQQRGTAIGSMVSGVDRGYFS 130
            G P  R   + E+L+ +V   P ++  + V  +    +      +  S V+G    YF 
Sbjct: 76  -GAPNFRAADV-EALLTQV---PSLKAVAPVVSSTVTLVAGAENWS--SSVTGSTNAYFV 128

Query: 131 LAGLKLTLGSRDFSLHDQHNHRRVAILGDHVAA---TSQLKIGDEFKIRGIAFRVIGIMD 187
               KL  G R FS  +    + V ++G+ V       Q  +G+  +++  +  ++GI+ 
Sbjct: 129 AGNWKLAAG-RQFSDEEMRAGKAVCVIGNTVKQKLFAGQSPLGNAVRVKNFSCEIVGILA 187

Query: 188 DESS-RFSFGDNQKVFIPSSTFKD--IWDTQPNMMLVLPAQ-GVSSWALREQLRHTFAQR 243
            +         +  V +P  T +      TQ    L+L  + G SS  + EQ+R    +R
Sbjct: 188 SKGQGAMGMDQDDVVLMPLVTAQRRLTGKTQDVSTLMLSLKDGASSPRVMEQIRQLMRER 247

Query: 244 LHFSPEDQEAVFLPDFGSGVAVITAILRGIQAFLAASGMMTMAVGILGVANMMFLAVTER 303
              +  D +   L D       ++  +  +   L A   +++ VG +G+ N+M ++VTER
Sbjct: 248 RKLAENDDDNFNLMDTKQIAEALSGTIGTMTTLLGAVAAVSLLVGGIGIMNIMLVSVTER 307

Query: 304 TREIGVRLAIGATPQRIQQQFLLEGLLLVVIGALVGLLLAYFGVLLLNHLGLPTWLGEPV 363
           TREIG+RLAIGA    +  QFL+E + L   G LVG++LA     LL  LGL   +G P 
Sbjct: 308 TREIGIRLAIGALENEVLLQFLIEAVALSAFGGLVGIILA-----LLACLGLSALMGMPF 362

Query: 364 ITSTTV-WLSMLVTSILALAAAYFPARRAAQLEPVIAL 400
           + +  +  L+   ++ + +   Y PARRAA L+P+ AL
Sbjct: 363 LFNPGINLLAFGFSAAIGVIFGYVPARRAAGLDPIEAL 400