Pairwise Alignments

Query, 404 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 413 a.a., ABC transporter permease from Lysobacter sp. OAE881

 Score =  108 bits (271), Expect = 2e-28
 Identities = 105/426 (24%), Positives = 193/426 (45%), Gaps = 50/426 (11%)

Query: 4   LLQQSWQTLLAHRLKSVLAITAISWGVISVVILMALGEGFYRAQTESFRFLLQETQMVAS 63
           +L+ +   L  + ++S L    +  G+ +V++++++G+G  +   +    L  +   ++ 
Sbjct: 6   ILRTAIYALRGNWMRSALTSLGVIIGIAAVIVMVSVGQGTQQEIDKMVSGLGSQRLDISP 65

Query: 64  GQTSEVWQG---MPARRPIQLTESLMREVAQR-PEIQRYS--------IVYENREVSITQ 111
           G       G   M +     L E  +  +    PE+Q  +        +VY     S + 
Sbjct: 66  GAGRGPGGGGVRMSSSSFFTLNEGDVDAIRNEIPEVQYVAGALRGNTQVVYAENNASTSW 125

Query: 112 QRGTAIGSMVSGVDRGYFSLAGLKLTLGSRDFSLHDQHNHRRVAILGDHVAAT---SQLK 168
           Q          GV   +F + G  +  GS  F   D  +  +  I+G+ V  T    +  
Sbjct: 126 Q----------GVQADFFDINGWTIANGS-GFDTQDYTSAGKSVIIGETVRRTLFGDETG 174

Query: 169 IGDEFKIRGIAFRVIGIMDDESSRFSFGDNQK--VFIPSSTFKDIWDTQPNMMLVLPAQG 226
           +G   ++  + F V+G ++ +     FG +Q   V +P  T +     +    + LP+  
Sbjct: 175 VGQTIRLGRVPFTVVGTLNPKGQG-GFGQDQDDVVMVPLETAR----RRLMGAMGLPSGA 229

Query: 227 VSSWALR----EQLRHT-------FAQRLHFSPEDQEAVFLPDFGSGVAVITAILRGIQA 275
           V   AL     + L +T         QR    P +++   + +    VA  TA  R +  
Sbjct: 230 VMQIALTVADAKDLSYTQGEVEALLRQRHRIKPGEEDDFNVRNISEIVATRTATTRLMSL 289

Query: 276 FLAASGMMTMAVGILGVANMMFLAVTERTREIGVRLAIGATPQRIQQQFLLEGLLLVVIG 335
            L A   +++ VG +G+ N+M ++VTER REIG+R+A+GA P  +++QFL E +LL + G
Sbjct: 290 LLGAVATISLIVGGIGIMNIMLVSVTERIREIGLRMAVGAGPSDVRRQFLAEAMLLSLGG 349

Query: 336 ALVGLLLAYFGVLLLNHLG-LPTWLGEPVITSTTVWLSMLVTSILALAAAYFPARRAAQL 394
            ++G+++   G L +     LP  L   VI      L+   + +  L   Y+PAR+A+QL
Sbjct: 350 GVLGIVIGVVGALAVGRFSDLPVALNGQVIA-----LAATFSIMTGLFFGYYPARKASQL 404

Query: 395 EPVIAL 400
           +P+ AL
Sbjct: 405 DPIEAL 410