Pairwise Alignments

Query, 404 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 647 a.a., macrolide ABC transporter permease/ATP-binding protein MacB from Klebsiella michiganensis M5al

 Score =  127 bits (319), Expect = 1e-33
 Identities = 113/410 (27%), Positives = 194/410 (47%), Gaps = 35/410 (8%)

Query: 5   LQQSWQTLLAHRLKSVLAITAISWGVISVVILMALGEGFYRAQTESFRFLLQETQMVASG 64
           ++ +W++LL HR+++ L++  I  G+ SVV  MA+GEG  ++       L   T  +  G
Sbjct: 258 VRMAWRSLLGHRMRAFLSMLGIIIGISSVVSSMAVGEGARQSIMNEIGKLGNTTLEIRPG 317

Query: 65  QTSEVWQGMPARRPIQLTESLMREVA---QRPEIQRYSIVYENREVSITQQRGTAIGSMV 121
                  G  ++RP       + ++A   ++P +Q  S +  +   ++ Q   ++I  ++
Sbjct: 318 T------GWGSKRPDMERALSLDDIASLGRQPWVQGVSPIVSSMTTAVRQGFDSSI--IL 369

Query: 122 SGVDRGYFSLAGLKLTLGSRDFSLHDQHNHRRVAILGDHVAAT----SQLKIGDEFKIRG 177
           SGV   YFSL G++   G+  F+  D  +   V +L +    T    ++  +G   +I G
Sbjct: 370 SGVSAEYFSLQGMRFIQGN-GFTHRDVEDREPVLVLDETSRETLFPGNEDPLGKIVQIAG 428

Query: 178 IAFRVIGIMDDESSRFSFGDNQKVFIPSSTFKDIWDTQPNMMLVLPAQGVSSW--ALREQ 235
             +RVIGI      +   G        +S  + I   +P   L L  Q   S   A R  
Sbjct: 429 APWRVIGIASKPGPKVVSGFMSAWIPYTSLLQRISGDKPLEALTLRFQETLSPQDAARRA 488

Query: 236 LRHTFAQR----LHFSPEDQEAVFLPDFGSGVAVITAILRGIQAFLAASGMMTMAVGILG 291
            RH   +          ++Q A  L      ++++          + A   +++ VG +G
Sbjct: 489 ERHLIREHGKKDFFVQTDEQLAKALQKTSDSMSLL----------ITAIAAISLLVGGVG 538

Query: 292 VANMMFLAVTERTREIGVRLAIGATPQRIQQQFLLEGLLLVVIGALVGLLLAYFGVLLLN 351
           V N+M ++VTERT EIG+RL++GA P  I  QFL+E +++  +G L G+L ++      N
Sbjct: 539 VMNIMLVSVTERTHEIGIRLSVGARPSDIMHQFLIEAVMICALGGLTGVLGSWAAG---N 595

Query: 352 HLGLPTWLGEPVITSTTVWLSMLVTSILALAAAYFPARRAAQLEPVIALS 401
              L T     V T   V ++   ++++ L   YFPARRAA+L P  AL+
Sbjct: 596 LFALLTQEFSMVFTWLPVAMACGFSALIGLTFGYFPARRAARLNPTEALA 645