Pairwise Alignments

Query, 419 a.a., TolC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 479 a.a., Type I secretion outer membrane protein, TolC precursor from Pseudomonas fluorescens FW300-N2E2

 Score = 91.7 bits (226), Expect = 4e-23
 Identities = 86/414 (20%), Positives = 170/414 (41%), Gaps = 29/414 (7%)

Query: 29  WQQAKQQSPDAHIAELSVQLSEQDKYLAKSDLLPSLSGSAGMNWSESQ---------NGS 79
           +Q+A   + D   A       ++    A++ LLP+LS  A +N + ++           S
Sbjct: 36  YQEAVDNNADLAAARAQYGAQKEVVPQARAGLLPNLSAGADLNNTRTELDQPAMTANRSS 95

Query: 80  SSYGATIEQTLWDSRKWSALDKADADWVLAQLERNQAYNQLAHQLLSAYFALAEAQSNLT 139
           + Y AT+ Q ++ + +W  L  A +    A L+ +     +  Q   +YF +  +Q NL 
Sbjct: 96  TVYQATLSQPIFRADRWFQLQAAKSVDEQASLQLSATEQNMILQSAESYFNVLRSQDNLA 155

Query: 140 LAQQKQADGAQLLAIAEQRYLAGKIKSVELEELRVNQLDEESTILNAQAELETKRSQLSI 199
             + ++A   + L  + +R+  G     ++ + + +     +  + AQ +++     L  
Sbjct: 156 STKAEEAAFKRQLDQSNERFDVGLSDKTDVLQSQASYDTARANRILAQRQVDDAFEALIT 215

Query: 200 LINASAPQVDEVDTQTPT-PSWPFSAELDDWLTAAKDHSPELLIAIQKVAISQIAKQQSQ 258
           L N     +  +    P  P  P  A+   W+  A   +  LL +   V  ++   +Q +
Sbjct: 216 LTNRQYNSLQGIVHTLPILPPAPNDAKA--WVDTAAKQNLNLLASNYAVTAAEDTLRQRK 273

Query: 259 SGYYPSLRASAGYQDGD-------------QRNG----EFNAGLTLSIPIDLNGATRSDN 301
           +G+ P+L A A Y+ GD             QR G    +   GL LSIP+   G T S  
Sbjct: 274 AGHAPTLDAIAQYKKGDNDGLGFTNPNPTGQRYGGDAEQRTIGLQLSIPLYSGGLTSSQV 333

Query: 302 EKAHLNWLMAQQQQRKVEIGLHQNLRQQIQQVEIEWQQITMADQQVTHRDKVLRSKQQLF 361
            +++      +QQ+  +   + +N R   + V  + +Q+    Q +      + + +  +
Sbjct: 334 RESYSQLTQTEQQREALRRQVVENTRNLHRAVNTDVEQVQARRQSIISNQSAVEATEIGY 393

Query: 362 DAGLAEASDLIDVHNSLFRAKHNLASRWYSYWRQRIELLKLTGQLNDNAIAQLS 415
             G     D++D    L+ +  N  +  Y Y    + L +  G L+   +  LS
Sbjct: 394 QVGTRNIVDVLDAQRQLYTSVRNYNNARYDYILDNLRLKQAAGTLSPADLQDLS 447