Pairwise Alignments

Query, 419 a.a., TolC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 449 a.a., Type I secretion outer membrane protein, TolC precursor from Pseudomonas fluorescens FW300-N2E2

 Score =  110 bits (275), Expect = 9e-29
 Identities = 93/421 (22%), Positives = 176/421 (41%), Gaps = 28/421 (6%)

Query: 23  LSIEQAWQQAKQQSPDAHIAELSVQLSEQDKYLAKSDLLPSLSGSAGMNWSESQNG---- 78
           LS+  A+  ++   P    A  + + S  ++ + +  L P +S ++   +    +G    
Sbjct: 32  LSLTAAYDASRLNDPTVQSAAHAFEASRHEEDIGRGGLYPQVSLTSRYGYGGRTDGGDDS 91

Query: 79  ----SSSYGAT-----IEQTLWDSRKWSALDKADADWVLAQLERNQAYNQLAHQLLSAYF 129
               S+ Y A       +Q L+D  +W+A  +  A   L     + A   L  ++   YF
Sbjct: 92  TYVNSNDYQANNVTLAAQQPLYDKARWAAYQEGKARGQLGTQVFDVAGQTLYDRVAKGYF 151

Query: 130 ALAEAQSNLTLAQQKQADGAQLLAIAEQRYLAGKIKSVELEE----LRVNQLDEESTILN 185
            +A A++ + L QQ++A    L+  +++ Y  G+    +++E    L + Q  E      
Sbjct: 152 DVARAENEIKLIQQQKAAIQGLVVQSKKLYEGGQGAITDIDEAQARLDLVQAQEAEAQAR 211

Query: 186 AQAELETKRSQLSILINASAPQVDEVDTQTPTPSWPFSAELDDWLTAAKDHSPELLIAIQ 245
             A L     + S+ I+   P  +E+   +P P      +L  W   A++ SPEL   + 
Sbjct: 212 RVAALRALSGRASVPIDDILPMREELAAGSPIPP---EQDLPYWTAIAREASPELAARLA 268

Query: 246 KVAISQIAKQQSQSGYYPSL--------RASAGYQDGDQRNGEFNAGLTLSIPIDLNGAT 297
            V +++      ++G+YP+L        R +  YQ+ D R   +  G+ L IP+   GA 
Sbjct: 269 AVKVAEAQADSQRAGHYPTLSLTTQLTRRETRQYQELDPRQDTYYVGVQLDIPLYRGGAV 328

Query: 298 RSDNEKAHLNWLMAQQQQRKVEIGLHQNLRQQIQQVEIEWQQITMADQQVTHRDKVLRSK 357
           R+   KA      AQ         L +++      V   + +     + V    + L S 
Sbjct: 329 RASVAKAEAQLAGAQSDYDVQRQQLAEDIEADYLGVVAGFAKSKAMQRAVESNQRALTST 388

Query: 358 QQLFDAGLAEASDLIDVHNSLFRAKHNLASRWYSYWRQRIELLKLTGQLNDNAIAQLSGA 417
           ++ F  G+    D++D    LF+A+ +L +      +  + L   TGQ+N   + Q+   
Sbjct: 389 EKGFQGGVRSTVDILDAQQRLFQARRDLLNTKLDMLQSYVSLHTHTGQMNRAVLEQVQSL 448

Query: 418 F 418
           F
Sbjct: 449 F 449