Pairwise Alignments

Query, 419 a.a., TolC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 450 a.a., ABC-type protease exporter, outer membrane component PrtF/AprF from Pseudomonas fluorescens FW300-N1B4

 Score = 74.7 bits (182), Expect = 5e-18
 Identities = 95/451 (21%), Positives = 179/451 (39%), Gaps = 41/451 (9%)

Query: 1   MNKGFLTACVLTSLMASSSAFALSIEQAWQQAKQQSPDAHIAELSVQLSEQDKYLAKSDL 60
           MNK  L A  L +L+  +SA A+     ++QA +  P    A        +++ + ++ L
Sbjct: 1   MNKLSLLAATL-ALLTGNSAMAMGPFDIYEQALRNDPVFLGAIKERDAGLENRAIGRAGL 59

Query: 61  LPSLSGSAGMNWSESQNGS------------------SSYGATI--EQTLWDSRKWSALD 100
           LP +    G N+++ +N S                  SSYG+T+  +Q L D   ++A  
Sbjct: 60  LPRI----GYNYNKGRNTSKVTQINEGRPDFTEDRNYSSYGSTLTLQQPLLDYEAYAAYR 115

Query: 101 KADADWVLAQLERNQAYNQLAHQLLSAYFALAEAQSNLTLAQQKQADGAQLLAIAEQRYL 160
           K  A  + A         +L  ++L  Y     AQ  + +A+ K+    Q     EQ + 
Sbjct: 116 KGVAQSLFADENFRGKSQELLVRVLENYTKALFAQDQIDIARAKKKAFEQQFQQNEQMFR 175

Query: 161 AGKIKSVELEELRVNQLDEESTILNAQAELETKRSQLSILINASAPQVDEVDTQTPTPSW 220
            G+    ++ E         +  + A+ E +    +L  LI    P +D  D      ++
Sbjct: 176 QGEGTRTDILEAESRYELATAEEIEARDEQDAALRELGALIGV--PTIDIADLTPLDQNF 233

Query: 221 PF----SAELDDWLTAAKDHSPELLIAIQKVAISQIAKQQSQSGYYPSLRASAGYQDGDQ 276
                  A  D W   A  ++P L    Q V +++   +++++G+ P + A A  +  + 
Sbjct: 234 QTFTLQPANYDTWHEMAVANNPNLASQRQAVEVARYEVERNRAGHLPKVSAYASVRQNES 293

Query: 277 RNGEF--------NAGLTLSIPIDLNGATRSDNEKAHLNWLMAQQQ-QRKVEIGLHQNLR 327
            +G            G+ +++P+   G   +   +A      A+ +   K    L Q LR
Sbjct: 294 ESGNTYNQRYDTNTIGIEVNVPLYAGGGVSASTRQASRTMEQAEYELDGKTRETLIQ-LR 352

Query: 328 QQIQQVEIEWQQITMADQQVTHRDKVLRSKQQLFDAGLAEASDLIDVHNSLFRAKHNLAS 387
           +Q         ++    + +T  + ++ S +Q    G     D ++    LF  + +LA 
Sbjct: 353 RQFSACLSGVNKLRAYQKALTSAEALVISTKQSILGGERVNLDALNAEQQLFTTRRDLAQ 412

Query: 388 RWYSYWRQRIELLKLTGQLNDNAIAQLSGAF 418
             Y Y     +L    G L D  +A++  AF
Sbjct: 413 ARYDYLMAWTKLHYYAGTLGDQDLAKVDEAF 443