Pairwise Alignments

Query, 419 a.a., TolC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 435 a.a., Outer membrane protein from Pseudomonas stutzeri RCH2

 Score = 73.6 bits (179), Expect = 1e-17
 Identities = 88/387 (22%), Positives = 158/387 (40%), Gaps = 8/387 (2%)

Query: 19  SAFALSIEQAWQQAKQQSPDAHIAELSVQLSEQDKYLAKSDLLPSLSGSAGMNWSESQNG 78
           S  ++S  +A + A   SP+  +A   +  S      A +   P LS S      ++   
Sbjct: 44  SVESISFLRALELASSASPELAVARRELAASRALISQAGARPNPILSASQEGIRGDAPET 103

Query: 79  SSSYGATIEQTLWDSRKWSALDKADADWVLAQLERNQAYNQLAHQLLSAYFALAEAQSNL 138
           +      IE     S +  A  +A  D   A L+  QA  +L   ++ AY+ +  AQ  L
Sbjct: 104 TLELSQEIELGGKRSARIEAAQRA-LDVAAADLQDAQA--RLRGAVMGAYYDVLTAQERL 160

Query: 139 TLAQQKQADGAQLLAIAEQRYLAGKIKSVELEELRVNQLDEESTILNAQAELETKRSQLS 198
            LAQ       Q + +A +R  AG +  VE    RV     +  +  A AELE  R++L+
Sbjct: 161 DLAQAASKLAKQAVNVANRRVRAGMVSPVEETRARVAATGVQVELAQATAELEAARTRLA 220

Query: 199 ILINASAPQVDEVDTQTPTPSWPFSAELDDWLTAAKDHSPELLIAIQKVAISQIAKQQSQ 258
                  P+ + V  + P  + P   EL +  +   D S +L  A ++    + A +  +
Sbjct: 221 ANWGNPQPRFERV--KEPAEAVPPLPELAELYSRLND-SAQLTRARREAERRRAALKLER 277

Query: 259 SGYYPSLRASAGYQDGDQRNGEFNAGLTLSIPIDLNGATRSDNEKAHLNWLMAQQQQRKV 318
           +  + ++  S G Q  D+ NG     +++S+P+ L    + +   A      AQ +   V
Sbjct: 278 TNRFSNVTVSVGAQRSDEYNGTLGL-VSISMPLPLFDRNQGNIGAAQERAYQAQDELNAV 336

Query: 319 EIGLHQNLRQQIQQVEIEWQQI-TMADQQVTHRDKVLRSKQQLFDAGLAEASDLIDVHNS 377
            I L   L Q   ++    QQ   + +  +        +  + F+ G     D++D   +
Sbjct: 337 HIRLKSELSQAHMRLRTARQQFELLRNDMLPSAQSAYEAASKGFELGKFTFLDVLDAQRT 396

Query: 378 LFRAKHNLASRWYSYWRQRIELLKLTG 404
           LF+A+    S      +   E+ ++ G
Sbjct: 397 LFQARSQYLSALSQANQAAAEISRIVG 423