Pairwise Alignments

Query, 419 a.a., TolC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 451 a.a., Type I secretion outer membrane protein, TolC precursor from Acidovorax sp. GW101-3H11

 Score = 88.6 bits (218), Expect = 4e-22
 Identities = 88/428 (20%), Positives = 181/428 (42%), Gaps = 32/428 (7%)

Query: 20  AFALSIEQAWQQAKQQSPDAHIAELSVQLSEQDKYLAKSDLLPSLSGSAGMNWSESQNGS 79
           A+++ ++QA+Q A  Q      A  +  + ++    AK+   P+++ SA  N ++  N  
Sbjct: 26  AWSMDLQQAYQAALLQDATIRAARAAADVGDERVEQAKAMRYPNVAFSAARNRNDLSNTQ 85

Query: 80  --------------SSYGATIEQTLWDSRKWSALDKADADWVLAQL--ERNQAYNQLAHQ 123
                         +S+ AT+       RK  ++    A  + A++  + ++    L  +
Sbjct: 86  RNVLGRSVTVDENYTSHNATLTLRQPVYRKSLSVGLEQAHQMRAEVGAQLDRELQNLGVR 145

Query: 124 LLSAYFALAEAQSNLTLAQQKQADGAQLLAIAEQRYLAGKIKSVELEELRVNQLDEESTI 183
           +  AY  L  AQ  L LA+ ++      L  A +   AG     +++E +       +  
Sbjct: 146 VTDAYLQLLLAQDQLALARAQKNTTTTQLDAARKLLDAGSGTRTDIDEAQARLDMAVAQE 205

Query: 184 LNAQAELETKRSQLSILINASAPQVDEVDTQTPTPSWPFSAELDDWLTAAKDHSPELLIA 243
           L  + +L+  R QL  L+N     +  +D        P    ++DWL  A+D+SPE+   
Sbjct: 206 LEIRQQLDYARRQLETLVNQPVEALSPLDESKFAAWAPEQRSVEDWLALAEDNSPEIRQQ 265

Query: 244 IQKVAISQIAKQQSQSGYYPSLRASAGYQDGDQRNGEFNA------------GLTLSIPI 291
             ++ ++++  +++++G+ P+L A A +     R+G  N             GL L++P+
Sbjct: 266 KARLDVARLEIEKARTGHLPTLDAVAQW----TRSGSENVTTPSSSYTNRVIGLQLNMPL 321

Query: 292 DLNGATRSDNEKAHLNWLMAQQQQRKVEIGLHQNLRQQIQQVEIEWQQITMADQQVTHRD 351
              G   S   +A    + A++        L   +  + + V     +I   +Q      
Sbjct: 322 FAGGYVSSTVRQAVAEQVQARELLESARRDLSLRIHTEFRGVSEGRLRIRALEQAARSAT 381

Query: 352 KVLRSKQQLFDAGLAEASDLIDVHNSLFRAKHNLASRWYSYWRQRIELLKLTGQLNDNAI 411
           +++ S ++ F+ G     D+++       A  +LA   Y+Y    + L  L G   D++I
Sbjct: 382 QLVVSSRRSFEGGARTLVDILNAEQQKELALRDLARARYTYLVSCVRLQALAGGDRDSSI 441

Query: 412 AQLSGAFR 419
           A ++  F+
Sbjct: 442 AAVNALFK 449