Pairwise Alignments

Query, 419 a.a., TolC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., Type I secretion outer membrane protein, TolC precursor from Xanthomonas campestris pv. campestris strain 8004

 Score = 73.9 bits (180), Expect = 9e-18
 Identities = 90/435 (20%), Positives = 182/435 (41%), Gaps = 30/435 (6%)

Query: 11  LTSLMASSSAFALSIEQAWQQAKQQSPDAHIAELSVQLSEQDKYLAKSDLLPSLSGSAGM 70
           L + +   +A A  + Q ++ A+   P   +AE +  ++ + +  A++ LLP L+G+   
Sbjct: 10  LAAALFPMAAHATDLLQVYEMARNGDPQLAVAESTRLVNREGQVQARAALLPQLNGAFDY 69

Query: 71  NWS----ESQNG---SSSYGATIE--QTLWDSRKWSALDKADADWVLAQLERNQAYNQLA 121
           + +    E Q+G   +SS  + I+  QT+++  ++S L         A      A N L 
Sbjct: 70  SKAHREIEGQDGRITTSSRSSQIQGSQTIFNWSQFSTLRAQREVAKAADFTLESANNDLI 129

Query: 122 HQLLSAYFALAEAQSNLTLAQQKQADGAQLLAIAEQRYLAGKIKSVELEELRVNQLDEES 181
            +  +AYF +     +L  A+  +A   +    A++R   G     ++ E R       +
Sbjct: 130 TRTSAAYFQVLVGIESLAAAETNEAAAKKQFDYADKRLEVGLAPITDVHEARAQYDQARA 189

Query: 182 TILNAQAELETKRSQLSILINASAPQVDEVDTQTPTPSWPFS-AELDDWLTAAKDHSPEL 240
             +NA+  L+     L+ L       +  +  +   P  P + + +D  + +A   +P L
Sbjct: 190 DTINARNTLKDYYQALTELTGQPVVGLRALP-ENFRPEVPAAYSNVDQLVASAIADNPAL 248

Query: 241 LIAIQKVAISQIAKQQSQSGYYP------SLRASAGYQDGDQRNGEFNA----------G 284
                +V+ ++ +   +++G+ P      S+  S  +  G   +G F            G
Sbjct: 249 KAQQLQVSAAEASINAARAGHLPTVNLTGSVGRSNSWGTGAAESGVFTTQGRDIDTDSIG 308

Query: 285 LTLSIPIDLNGATRSDNEKAHLNWLMAQQQQRKVEIGLHQNLRQQIQQVEIEWQQITMAD 344
           +++SIPI   GAT+S   +A     + Q    + +  L +N R   Q V     ++    
Sbjct: 309 ISVSIPIFAGGATQSAVRQAISQRDIQQDTYEQQKRALDRNTRNAYQTVVAGISEVEARR 368

Query: 345 QQVTHRDKVLRSKQQLFDAGLAEASDLIDVHNSLFRAKHNLASRWYSYWRQRIELLKLTG 404
             V        + Q   + G     D++    +LF+A+   A   Y++ + R+ L +  G
Sbjct: 369 LSVVSAQAAYDASQVGLEVGTRTVLDVVQNQRTLFQAQQLYAQARYTFLQNRLLLAQAIG 428

Query: 405 QLNDNAIAQLSGAFR 419
           +++   IA+L    R
Sbjct: 429 KID---IAELQDVNR 440