Pairwise Alignments

Query, 419 a.a., TolC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 447 a.a., type I secretion outer membrane protein, TolC family from Dechlorosoma suillum PS

 Score = 96.3 bits (238), Expect = 2e-24
 Identities = 92/439 (20%), Positives = 187/439 (42%), Gaps = 36/439 (8%)

Query: 10  VLTSLMASSSAFALSIEQAWQQAKQQSPDAHIAELSVQLSEQDKYLAKSDLLPSLSGSAG 69
           +L+SL  +++A    + Q +++A         A+ +++   +     ++ LLP+L  S  
Sbjct: 9   LLSSLFIAAAAQGADLLQIYKEALDNDAQFTAAKHTLEAGREKLPQGRAGLLPTLGVSVN 68

Query: 70  MNWSE--------------SQNGSSSYGATIEQTLWDSRKWSALDKADADWVLAQLERNQ 115
             W++               Q  S  Y  ++ Q L+  + W   D+A      A+ +  Q
Sbjct: 69  TMWNDVEYQRRVSGAAVATGQYNSHGYSVSLSQPLFRWQNWMQYDQAKLQVAQAEAQFLQ 128

Query: 116 AYNQLAHQLLSAYFALAEAQSNLTLAQQKQADGAQLLAIAEQRYLAGKIKSVELEELRVN 175
           A   L  ++  AYF +  AQ NL   Q +++  AQ L +A++ +  G     +  E +  
Sbjct: 129 ARQDLILRVAQAYFDVLYAQENLRSLQAQKSAIAQQLELAKKSFEVGTATITDTHEAQSR 188

Query: 176 QLDEESTILNAQAELETKRSQLSILINASAPQVDEVDTQTPTPSWPFSAELDDWLTAAKD 235
                +  + A+++LE KR  L  +I   A ++  + T T T   P  A ++DW+ +A+ 
Sbjct: 189 YDLSTAQEIAAESDLEIKRRNLQAIIGREAGELATLRTDT-TLEPPKPANMNDWVASAEK 247

Query: 236 HSPELLIAIQKVAISQIAKQQSQSGYYPSL-----RASAGYQDGDQRNGEFNA------- 283
            +  + I   ++ I+     + ++G++P+L     R++A   +G Q N  F         
Sbjct: 248 DALAVQIQEAQLEITDKEVSKQRAGHFPTLDLVATRSNAVQTNGVQTNPLFPGVGYEQDS 307

Query: 284 ---GLTLSIPIDLNGATRSDNEKAHLNWLMAQQQQRKVEIGLHQ---NLRQQIQQVEIEW 337
              GL L+IP+   GA  S   +A  +    +  +  +E    Q     RQ    V    
Sbjct: 308 TAIGLQLNIPLFQGGAVLSKQREAEAS---REATRSTLEYSRRQAALGARQYYLGVVNGL 364

Query: 338 QQITMADQQVTHRDKVLRSKQQLFDAGLAEASDLIDVHNSLFRAKHNLASRWYSYWRQRI 397
            Q+   +  +      L S +  ++ G+    D+++    ++  + +LA   +     ++
Sbjct: 365 AQVRALEAALVSSKSALDSNKLGYEVGVRINIDVLNAEQQVYSTQRDLAKARFDTLVNQL 424

Query: 398 ELLKLTGQLNDNAIAQLSG 416
            L  + G L D  + +++G
Sbjct: 425 RLKGVVGSLTDEDLQRVNG 443