Pairwise Alignments

Query, 419 a.a., TolC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., type I secretion outer membrane protein, TolC family from Marinobacter adhaerens HP15

 Score =  109 bits (272), Expect = 2e-28
 Identities = 93/430 (21%), Positives = 185/430 (43%), Gaps = 28/430 (6%)

Query: 11  LTSLMASSSAFALSIEQAWQQAKQQSPDAHIAELSVQLSEQDKYLAKSDLLPSLSGSAGM 70
           L  LMA+  A ++ + + +++A         A  S +  +    +++S LLP +      
Sbjct: 9   LIGLMAAQPALSMDLVETYEKALSYDSGIAAARASFEAQQAASDVSQSALLPQIGAFGEG 68

Query: 71  NWSE----SQNGSS---SYGATIEQTLWDSRKWSALDKADADWVLAQLERNQAYNQLAHQ 123
           N+ +    SQ+ S    +YG  + Q L+ +  W   D +      A+ E N A  QL   
Sbjct: 69  NYIDVDGPSQDNSYQELNYGVQLTQPLFRADAWFRYDASKFQTESARAEYNLAQQQLILD 128

Query: 124 LLSAYFALAEAQSNLTLAQQKQADGAQLLAIAEQRYLAGKIKSVELEELRVNQLDEESTI 183
           + +AYF +  A+  +T A+  +A   +    A++R+  G I   E+ E R +  D +S  
Sbjct: 129 VATAYFNVLRARDTVTTARATEAAIQRQYEQAQERFDVGLIAITEVYEARASYDDSKSQR 188

Query: 184 LNAQAELETKRSQLSILINASAPQVDEVDTQTPTPSWPFSAELDDWLTAAKDHSPELLIA 243
           + A+ +L   R QL+ L    A ++D +    P    P   +   W   A + +  +  A
Sbjct: 189 IAAENQLNVAREQLARLTGEYAEELDNLRQNFPLGR-PDPMDPSAWEATALEQNWSIQSA 247

Query: 244 IQKVAISQIAKQQSQSGYYPSLRASAGY------------------QDGDQRNGEFNAGL 285
           + ++  ++   +++++G+YP+L  +A Y                  QDG    G    GL
Sbjct: 248 LFELNANEAGLREAKAGHYPTLDLNASYGKTDLNGIDGANAPITSQQDGTTTRGTI--GL 305

Query: 286 TLSIPIDLNGATRSDNEKAHLNWLMAQQQQRKVEIGLHQNLRQQIQQVEIEWQQITMADQ 345
           TL++P+   G T++   +      +A+Q    V   +  N R     V    +  +  +Q
Sbjct: 306 TLNVPLYSGGGTQAGVRQQRSLVTVAEQSLNTVRRDVRVNTRSLFLTVNNNVETASALEQ 365

Query: 346 QVTHRDKVLRSKQQLFDAGLAEASDLIDVHNSLFRAKHNLASRWYSYWRQRIELLKLTGQ 405
            +  R   L + +  ++ G     +++D   + + A  + A+  Y Y    ++L +  G 
Sbjct: 366 TIVSRRSALDATRAGYEVGTRNIVEVLDAERAYYVALRDYANARYDYVINSLQLKQAAGT 425

Query: 406 LNDNAIAQLS 415
           L+   + +L+
Sbjct: 426 LSPQDLIELN 435