Pairwise Alignments

Query, 419 a.a., TolC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 482 a.a., outer membrane channel protein TolC from Klebsiella michiganensis M5al

 Score = 86.3 bits (212), Expect = 2e-21
 Identities = 91/419 (21%), Positives = 175/419 (41%), Gaps = 23/419 (5%)

Query: 17  SSSAFALSIEQAWQQAKQQSPDAHIAELSVQLSEQDKYLAKSDLLPSLSGSAGMNWS--- 73
           S+ + A ++ Q +QQA+  +PD   +      + +    A+S LLP L   A   ++   
Sbjct: 17  SAMSQAENLLQVYQQARISNPDLRKSAADRDAAFEKINEARSPLLPQLGLGADYTYTSGF 76

Query: 74  ---ESQNGSSSYGAT-IEQTLWDSRKWSALDKADADWVLAQLERNQAYNQLAHQLLSAYF 129
              + QN + + G+  + Q L+D  KW AL   + +  +  +        L     +AYF
Sbjct: 77  RDYKDQNSNVTSGSLQLTQVLFDMSKWRALTLQEKNAGIQDVTYQTDQQTLILNTATAYF 136

Query: 130 ALAEAQSNLTLAQ-QKQADGAQLLAIAEQRYLAGKIKSVELEELRVNQLDEESTILNAQA 188
            +  A   L+  + QKQA   QL     QR+  G +   +++  R       +  + A+ 
Sbjct: 137 KVLAAIDTLSYTEAQKQAIYRQLDQTT-QRFNVGLVAITDVQNARSQYDAVLANEVTARN 195

Query: 189 ELETKRSQLSILINASAPQVDEVDTQTPTPSWPFSAELDDWLTAAKDHSPELLIAIQKVA 248
            L+    +L  +     P++  ++      + P  + ++  L  A++ +  LL A     
Sbjct: 196 SLDNAVEELRQVTGNYYPELASLNVDGFKTTKP--SAVNALLKEAENRNLSLLQARLSQD 253

Query: 249 ISQIAKQQSQSGYYPSLR--ASAGYQDG----------DQRNGEFNAGLTLSIPIDLNGA 296
           +++   +Q+Q G+ P+L   AS+G  +           D   G+   GL+ S+P+   G 
Sbjct: 254 LAREQIRQAQDGHLPTLNLNASSGVSNNRYSGSKSLAQDADVGQNKIGLSFSLPLYQGGM 313

Query: 297 TRSDNEKAHLNWLMAQQQQRKVEIGLHQNLRQQIQQVEIEWQQITMADQQVTHRDKVLRS 356
             S  ++A  N++ A +Q       + Q +R     V      I    Q V      L +
Sbjct: 314 VNSQVKQAQYNFVGASEQLESAHRSVVQTVRSSFNNVNASISSINAYKQAVVSAQSSLDA 373

Query: 357 KQQLFDAGLAEASDLIDVHNSLFRAKHNLASRWYSYWRQRIELLKLTGQLNDNAIAQLS 415
            +  +  G     D++D   +L+ AK  L++  Y+Y    + +    G LN+  +  L+
Sbjct: 374 MEAGYSVGTRTIVDVLDATTTLYNAKQQLSNARYNYLINELNIKSALGTLNEQDLVALN 432