Pairwise Alignments

Query, 419 a.a., TolC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 495 a.a., channel protein TolC from Cupriavidus basilensis FW507-4G11

 Score = 83.6 bits (205), Expect = 1e-20
 Identities = 95/433 (21%), Positives = 181/433 (41%), Gaps = 35/433 (8%)

Query: 11  LTSLMASSSAFALSIEQAWQQAKQQSPDAHIAELSVQLSEQDKYL--AKSDLLPSLSGSA 68
           L +L+   +A    + Q ++ A  Q+ DA  A    QL    + L   +S LLP +SG+ 
Sbjct: 22  LLALLHLPAAHGADLLQVYRDA--QANDAQFASARAQLVASQEKLPQGRSGLLPQVSGTL 79

Query: 69  GMNWSESQN----------GSSSYGATIEQTLWDSRKWSALDKADADWVLAQLERNQAYN 118
               +               ++++   + Q L+   +W    + +   +  ++  +QA  
Sbjct: 80  NATRTNVDQTVPLVSDRFINNNNWSLQLIQPLFRWDRWETYKQGELAALAGEVTFSQAQL 139

Query: 119 QLAHQLLSAYFALAEAQSNLTLA-QQKQADGAQLLAIAEQRYLAGKIKSVELEELRVNQL 177
            L  +   AYF +  AQ NL LA  QK+A G Q LA A++ +  G     +  + +    
Sbjct: 140 DLITRTSQAYFDVLAAQDNLYLAGAQKKAIGEQ-LAQAKRNFEVGTATITDANDAQARYD 198

Query: 178 DEESTILNAQAELETKRSQLSILINASAPQVDEVDTQTPTPSWPFSAELDDWLTAAKDHS 237
              ST + AQ++LE +R+ L  +      ++  + T    P  P   +++ W + A++ +
Sbjct: 199 LATSTEIAAQSDLEIRRANLQQITGKPVDELLGLRTAATLPG-PQPPDVNTWASQAENTN 257

Query: 238 PELLIAIQKVAISQIAKQQSQSGYYPS--LRASAGYQDG----------DQRNGEFNAGL 285
           P++ +A   +  +Q    +++SG+ PS  L AS G+ +             R      G+
Sbjct: 258 PQVGLARYNLDSAQREYNKARSGHLPSVDLVASYGFVNATGNAAQQVNVSSRYNSAQIGV 317

Query: 286 TLSIPIDLNGATRSDNEKAHLNWLMAQQQQRKVEIGLH---QNLRQQIQQVEIEWQQITM 342
            LS+PI   G  +S   +      +A +    +E       Q+ RQ    V     Q+  
Sbjct: 318 QLSVPIYTGGQIQS---RVRETAALADKAASDLEFARRTAAQSARQTYSGVSNGLAQVKA 374

Query: 343 ADQQVTHRDKVLRSKQQLFDAGLAEASDLIDVHNSLFRAKHNLASRWYSYWRQRIELLKL 402
            +         + S Q  ++ G+    D+++    LF  + +LA   Y      + L   
Sbjct: 375 LEAAEHSAQSAVESNQLGYEVGVRINIDVLNAEAQLFSTRRDLAKARYDTIMNGLRLKAA 434

Query: 403 TGQLNDNAIAQLS 415
           TG L ++ + Q++
Sbjct: 435 TGALIEDDVVQIN 447