Pairwise Alignments

Query, 419 a.a., TolC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 483 a.a., type I secretion outer membrane protein rsaFb from Caulobacter crescentus NA1000

 Score = 75.5 bits (184), Expect = 3e-18
 Identities = 100/449 (22%), Positives = 195/449 (43%), Gaps = 49/449 (10%)

Query: 4   GFLTACVLTSLMASSSAFALS--IEQAWQQAKQQSPDAHIAELSVQLSEQDKYLAKSDLL 61
           G L A     L+A S + A +  +  A   A Q +P       S +++++    AK+   
Sbjct: 10  GLLAAACSAGLLAGSFSIANAETLADAIALAYQTNPTLQQQRASARITDEGVVQAKTGFR 69

Query: 62  PSLSGSA---GMNWSESQNGS------SSYGATIEQTLWDSRKWSA-LDKADADWVLAQL 111
           P++  +A   G N + +  G+      SS   +I Q L+   + SA +  A+AD VL+  
Sbjct: 70  PTVGATADITGANTNPASAGADVKLSGSSAALSIIQPLYTGGRASAGVSAAEAD-VLSAR 128

Query: 112 ERNQAYNQ-LAHQLLSAYFALAEAQSNLTLAQQKQADGAQLLAIAEQRYLAGKIKSVELE 170
           E  +A  Q +   ++ AY  +   Q  L +A++  A   + L  +  R+  G+I   ++ 
Sbjct: 129 EGLRAVEQGVLVSVVQAYVDVRRDQERLRIAKENVAVLQRQLEESNARFDVGEITRTDVA 188

Query: 171 ELRVNQLDEESTILNAQAELETKRSQLSILINASAPQVDEVDTQTPTPSWPFSAELDDWL 230
           + +      ++++  AQA+LE  R+  + ++  +  ++       P+ +    A +D   
Sbjct: 189 QSQARLASAKASLSGAQAQLEVSRASYAAVVGQTPGEL----APEPSLAGLLPASVDQAF 244

Query: 231 TAAKDHSPELLIA--IQKVAISQIAKQQSQSGYYP--SLRASAGYQDGDQRNG------- 279
            AA+ ++P +  A   ++ A +++A   +++GY P  S RAS GY D  +R+G       
Sbjct: 245 EAAQTNNPGVTSAKFNEEAAAARVA--VAKAGYRPTVSARASLGY-DATRRSGVGSQFDD 301

Query: 280 ---EFNAGLTLSIPIDLNGATRSDNEKAHLNWLMAQQQQRKVEIGLHQNLRQQIQQVEIE 336
                +  +T SIP+   G T S    A+       +++      +    R  IQQV   
Sbjct: 302 YSRTVSGAITASIPLFAGGLTTSQVRAAN-------ERESAARSAVEGAKRTAIQQVSNA 354

Query: 337 WQQITMADQQVTHRDKVLRSKQQLFD-------AGLAEASDLIDVHNSLFRAKHNLASRW 389
           W  +  +   +   ++ +R+ +  F+        GL    D+++    L  A+  L S  
Sbjct: 355 WSNLLASRAGLVANEEQVRATRIAFEGVRQEQQVGLRTTLDVLNAQLELSNAELALVSAR 414

Query: 390 YSYWRQRIELLKLTGQLNDNAIAQLSGAF 418
              +     +L+  GQL    +A  + A+
Sbjct: 415 RDEYLASAVVLQAMGQLEVTKLASNTAAY 443