Pairwise Alignments

Query, 377 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 421 a.a., multidrug efflux system transmembrane protein from Sinorhizobium meliloti 1021

 Score =  102 bits (254), Expect = 2e-26
 Identities = 99/393 (25%), Positives = 177/393 (45%), Gaps = 56/393 (14%)

Query: 2   AKRWTLLATLVGVGLAGGYYTLTYTPESSSPLPTL---NVSRGTIEKQAVAVGQIMPSHS 58
           ++R  + A LV   +  GYY   ++ + + P  T+    V+RG IE+   AVG +    S
Sbjct: 32  SRRPWIFALLVLAVVGTGYYA--WSRQGAPPATTVITQAVTRGDIEESVTAVGTLDAVKS 89

Query: 59  VAIKSQINGIVGEIYVREGQHVEQGQPLIKVRPNPTPQALTDASTELMQSEANL------ 112
           V   +Q++G +  ++V  G  VEQ Q + ++ P      +     EL   EA L      
Sbjct: 90  VDAGAQVSGQLKSLHVGIGDKVEQNQLIAEIDPASIENRIEIDEAELANLEAQLVSKKAQ 149

Query: 113 ----ESDLQRLANL--ERLVKQQIIPANYDDYVRAKADVKAKQAEVQQKRQNLELIRSGE 166
               +S+++R  NL     V Q  +     D+  A ADV+A +A++++++  L       
Sbjct: 150 LVLKQSNIERQRNLVATNSVSQSTLDQAVADHAAAGADVQAIEAQIRKQKATL---AGDR 206

Query: 167 ASIGQAKLSSTLYAPISGTILNIKVEVGEPIISTESSQAATEMIQLADMKNIVFKGSVSE 226
             +G  K    +YAP++GTI++   + G+ +    ++Q    ++ +AD+  +  K  VSE
Sbjct: 207 VDLGYTK----IYAPMAGTIVDDPAKEGQTL---NANQTTPTIVTIADLSTMTVKAQVSE 259

Query: 227 HDAAQLNAGMPASITVAPYPEQVINGQLTKVAIQSERLNNPENKDGKSFDNGFQVEIGQL 286
            D  +L  GM A  T+   P +   G+L ++    +  NN              +     
Sbjct: 260 ADVGKLKLGMDAYFTLLGQPGKRFTGKLRQIEPMPDTENN------------VVLYYALF 307

Query: 287 DIPENMTLRSGFSASAKITLQRAA--DVITLPERALQFEGETPMVLIADGSAQGYT---- 340
           D+P N T     S SA++   +AA  +V+ +P  AL+    T     +DG A+       
Sbjct: 308 DVP-NPTGELMMSMSAQVFFVQAAAKNVLVVPSAALR----TVEAAASDGPARAEVTVVA 362

Query: 341 ------AHPVKLGLSDGVQVEILEGVAEKDSIV 367
                    V++G+ + V  EI+ G+ E + +V
Sbjct: 363 PSGATQTRTVEVGVRNRVSAEIVSGLQEGEKVV 395