Pairwise Alignments

Query, 377 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 391 a.a., Secretion protein HlyD (NCBI) from Rhodospirillum rubrum S1H

 Score = 77.0 bits (188), Expect = 8e-19
 Identities = 63/222 (28%), Positives = 101/222 (45%), Gaps = 14/222 (6%)

Query: 28  ESSSPLPTLNVSRGTIEKQAVAVGQIMPSHSVAIKSQINGIVGEIYVREGQHVEQGQPLI 87
           + + P     V  G++E    AVG + P   V + +Q++G V  + V  G  VE+G  L 
Sbjct: 42  DKAPPPRQQTVELGSVENAITAVGSLQPKTYVDVGAQVSGKVSHLPVVIGDRVEKGDLLT 101

Query: 88  KVRP-------NPTPQALTDASTELMQSEANLESDLQRLANLERLVKQQIIPANYDDYVR 140
            + P            AL     +  ++EA L    Q+ A  ERL   Q    + D    
Sbjct: 102 VIDPRTYEARVRTDKAALAKLHADRRKAEAQLGLSRQQRARTERLF--QAKATSQDSLDS 159

Query: 141 AKADVKAKQAEVQQKRQNLELIRSGEASIGQAKLSST-LYAPISGTILNIKVEVGEPIIS 199
           A+  V   QA ++     +E   + E    QA L  T +YA +SGTI++I V  G+ +  
Sbjct: 160 ARTTVLVDQAAIESIDAQIEQALA-ELDADQADLDYTQVYATMSGTIVSIAVVEGQTL-- 216

Query: 200 TESSQAATEMIQLADMKNIVFKGSVSEHDAAQLNAGMPASIT 241
             S Q+A +++++AD+  +  K  V+E D   +  GMP   T
Sbjct: 217 -NSVQSAPDLMRIADLDTMTVKAEVAEADITAIKPGMPGYFT 257