Pairwise Alignments

Query, 377 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 371 a.a., macrolide transporter subunit MacA from Klebsiella michiganensis M5al

 Score = 88.2 bits (217), Expect = 3e-22
 Identities = 91/381 (23%), Positives = 166/381 (43%), Gaps = 44/381 (11%)

Query: 3   KRWTLLATLVGVGLAGGYYTLTYTPESSSPLP---TLNVSRGTIEKQAVAVGQIMPSHSV 59
           K W LLA +V      G+  L      ++PLP   TL V +G +++  +A G++     V
Sbjct: 9   KVWWLLAIVVLALAVWGWRIL------NAPLPQYQTLVVRKGDLQQSVLATGKLDALKKV 62

Query: 60  AIKSQINGIVGEIYVREGQHVEQGQPLIKVRPNPTPQALTDASTELMQSEANLES----- 114
            + +Q++G +  + V  G  V++ Q L  + P      + +    LM+  A L       
Sbjct: 63  DVGAQVSGQLKTLRVEIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQLNQARAER 122

Query: 115 --DLQRLANLERLVKQQIIPANYDDYVRAKADVKAKQAEVQQKRQNLELIRSGEASIGQA 172
                 LA  ++L ++Q++  +  D   A  D+  K+A++         ++  +A++  A
Sbjct: 123 KLSATTLARQQQLAQRQLV--SRQDLDTAATDLAVKEAQIGTIEAQ---VKRNQATLDTA 177

Query: 173 KLS---STLYAPISGTILNIKVEVGEPIISTESSQAATEMIQLADMKNIVFKGSVSEHDA 229
           K +   + + AP+SG +  I    G+ +I+   +Q A  ++ LAD+  ++ K  VSE D 
Sbjct: 178 KTNLDYTKILAPMSGEVTQITTLQGQTVIA---AQQAPNILTLADLSTMLVKAQVSEADV 234

Query: 230 AQLNAGMPASITVAPYPEQVINGQLTKVAIQSERLNNPENKDGKSFDNGFQVEIGQLDIP 289
             L  G  A  TV   P     G L  +    E++N          D  F     ++  P
Sbjct: 235 IHLKPGQKAWFTVLGDPLTRYEGTLKDILPTPEKVN----------DAIFYYARFEVPNP 284

Query: 290 ENMTLRSGFSASAKITLQRAADVITLPERALQ---FEGETPMVLIADGSAQGYTAHPVKL 346
           + + LR   +A   I L    +VITLP  AL     +    + L+  G  +      + +
Sbjct: 285 QGI-LRLEMTAQVHIQLSEVKNVITLPLSALGDAIGDNRYHVRLLRTGEVK---EREIVI 340

Query: 347 GLSDGVQVEILEGVAEKDSIV 367
           G  +   V +++G+ E D ++
Sbjct: 341 GARNDTDVAVVKGLEEGDEVI 361