Pairwise Alignments

Query, 309 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 307 a.a., Transcriptional regulator, LysR family from Pseudomonas fluorescens FW300-N2E2

 Score =  130 bits (327), Expect = 4e-35
 Identities = 86/300 (28%), Positives = 147/300 (49%), Gaps = 8/300 (2%)

Query: 8   LRSIDLNLLTILEKLLIHKHISQAAQALNMSQPAVSRALMRLREQFGDPLLVKVKNEYRL 67
           LR  D+NL+ + E L++ +++++ A+ L + QP +S AL RLR+ F DPL ++V +    
Sbjct: 6   LRKADINLMVVFETLMLERNVTRVAEKLFLGQPTISSALNRLRKMFNDPLFIRVGHRMEP 65

Query: 68  TAKGERLCSELERTLNTIRHML-VDDKFDPMHYSGVFTIGALDFEMMMIVPKLLARFQQR 126
           TA+ E +   L   L+++   L +   FDP   +  F IG  D     ++P LL+  +Q 
Sbjct: 66  TARAEEIIRHLSPALDSLSVALSLTHDFDPTSSTMTFRIGLSDDVEFGLLPPLLSSLRQE 125

Query: 127 APNLKLQIVPYNAYMPLHDYLEKVADLL--LYSTDESPTNVFKQRLFNDNYAVVMCRNHP 184
           AP +   +V +  Y  + D L    D+   +  T   P N  ++ L +    V+      
Sbjct: 126 APKIVF-VVQHVDYWRIPDLLAS-GDITVGISQTRGLPANAKRKLLRHIQPRVLRA---D 180

Query: 185 LANQPITLESYCQSRHVIISGNGLGKTDMDHELKKLNYQREVVASLPHFSMVPELLINTD 244
            ++ P+TL+ YC   HV++S        +D  L ++   R+VV S+P +S +P LL  TD
Sbjct: 181 ASDTPLTLDEYCARPHVLVSHTANVAGFVDEWLAEIGRTRQVVLSVPQYSALPALLAGTD 240

Query: 245 LIATLPRRLVTHLGQRYEITVADLPFYTADFRVEQFWHLIHHSSPIHQWVRQEIKNLVYE 304
           LIA+LP      +    ++     PF T    +   W     S P  +W+R  ++  + E
Sbjct: 241 LIASLPDYTAAAMAASGQLFNEPFPFKTPTLDLSMVWLSHVDSDPAERWLRSRLEAFMGE 300