Pairwise Alignments

Query, 309 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., Transcriptional regulator, LysR family from Pseudomonas fluorescens FW300-N2E2

 Score =  118 bits (296), Expect = 1e-31
 Identities = 89/297 (29%), Positives = 139/297 (46%), Gaps = 7/297 (2%)

Query: 8   LRSIDLNLLTILEKLLIHKHISQAAQALNMSQPAVSRALMRLREQFGDPLLVKVKNEYRL 67
           + S DLNLL  L+ LL    +++AA+ L +S  A+SRAL RLRE  GDPLLV+       
Sbjct: 1   MSSPDLNLLVTLDVLLSEGSVARAARRLQLSPSAMSRALARLRETTGDPLLVRAGRGLVP 60

Query: 68  TAKGERLCSELERTLNTIRHMLVDDKFDPM-HYSGVFTIGALDFEMMMIVPKLLARFQQR 126
           T +   L  ++   +   + +L       +   S  FT+   +  +      L+ R  ++
Sbjct: 61  TPRALELREQVSHLVQQAQAVLRPVTTPDLGRLSRTFTLRTREGFVENFAIDLITRIHEQ 120

Query: 127 APNLKLQIVPYNAYMPLHDYLEKVADL--LLYSTDESPTNVFKQRLFNDNYAVVMCRNHP 184
           AP ++L+ V            E   DL   +   D SP  +  Q LF+D    V+   HP
Sbjct: 121 APGVRLRFVE-KTDRDSTTLREGTVDLETAVVDKDTSP-ELRTQALFSDRLIGVVRAGHP 178

Query: 185 LANQPITLESYCQSRHVIISGNGLGKTDMDHELKKLNYQREVVASLPHFSMVPELLINTD 244
           L+   ++   Y    HV +S  GL    +D  L  LN  RE+V ++P FS    L  ++D
Sbjct: 179 LSQATVSAAGYAAGGHVGVSMRGLDHGLIDQALAALNLSREIVTTVPGFSSALGLARSSD 238

Query: 245 LIATLPRRLVTHLGQRYEITVADLPFYTADFRVEQFWHLIHHSSPIHQWVRQEIKNL 301
           LIA++P R    L  R  +    LPF    F +   WH    + P+H+W+R  ++ +
Sbjct: 239 LIASVPERYTASL--RVGLHSFTLPFSVPGFTIAMLWHPRMDADPVHRWLRSCLREV 293