Pairwise Alignments

Query, 309 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., Transcriptional regulator from Pseudomonas stutzeri RCH2

 Score =  159 bits (401), Expect = 1e-43
 Identities = 102/298 (34%), Positives = 149/298 (50%), Gaps = 6/298 (2%)

Query: 7   NLRSIDLNLLTILEKLLIHKHISQAAQALNMSQPAVSRALMRLREQFGDPLLVKVKNEYR 66
           NLR +DLNLL  L+ LL   ++++AA+ LN SQP+VS  L +LR+ F DPLL+      R
Sbjct: 8   NLRRLDLNLLVTLDVLLAEHNVTRAAERLNFSQPSVSVHLAKLRDIFDDPLLIPGPRGMR 67

Query: 67  LTAKGERLCSELERTLNTIRHMLVD-DKFDPMHYSGVFTIGALDFEMMMIVPKLLARFQQ 125
            TA+ E L   L   L  +   +     FDP     V+ I A D+    IV   LA  + 
Sbjct: 68  PTARAEELRVPLRLALEALEQAVAPASPFDPGAAQDVWRIAASDYGESAIVLPALAGLRC 127

Query: 126 RAPNLKLQIVPYNAYMPLHDYLEKVADLLLYSTDESPTNVFKQRLFNDNYAVVMCRNHPL 185
            AP  ++ +V            +   DL L++ D SP+N+ ++ LF + Y +     HP 
Sbjct: 128 AAPGTRIAVVEMQPSRIARQAEQGDIDLALHTVDGSPSNLRRRVLFTERYVLAGRAGHPR 187

Query: 186 ANQPITLESYCQSRHVIISGNGLG-KTDMDHELKKLNYQREVVASLPHFSMVPELLINTD 244
             +  TL+ +C    VI+S +G G     D  L     QR VV S+PHF  +  +L +TD
Sbjct: 188 LRRRPTLKQFCALDQVIVSPDGGGFHGATDDALAAHGLQRRVVLSVPHFLFLRSVLESTD 247

Query: 245 LIATLPRRLVTHLGQRYEITVADLPFYTADFRVEQFWHLIHHSSPIHQWVRQEIKNLV 302
           L+A LP RLV    Q   + V + P     + +   WH   H  P HQW+R++I N +
Sbjct: 248 LVAMLPERLV----QGAALQVVEAPLEIPGYEMAMLWHERAHRDPAHQWLREQIVNTI 301