Pairwise Alignments

Query, 309 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 316 a.a., LysR family transcriptional regulator from Rhodopseudomonas palustris CGA009

 Score =  144 bits (363), Expect = 3e-39
 Identities = 92/306 (30%), Positives = 148/306 (48%), Gaps = 7/306 (2%)

Query: 5   EINLRSIDLNLLTILEKLLIHKHISQAAQALNMSQPAVSRALMRLREQFGDPLLVKVKNE 64
           ++NL  +DLNLL  LE LL  ++++ AAQ + +SQPA+SRAL RLR    DPLLV+  + 
Sbjct: 3   DVNLAGLDLNLLPPLEALLRRRNVTHAAQDVGLSQPAMSRALSRLRILLADPLLVRGHHG 62

Query: 65  YRLTAKGERLCSELERTLNTIRHMLVDDKFDPMHYSGVFTIGALDFEMMMIVPKLLARFQ 124
             LT K + L   L   +  ++ +  + +FDP        I A D + +++ P L+AR  
Sbjct: 63  LVLTPKAQALVPLLSVAVADLKDLFRERRFDPATEQRTIRIAASDNQTVLLAPPLMARLA 122

Query: 125 QRAPNLKLQIVPYNAYMPLHDYLEKVA--DLLLYSTDESPTNVFKQRLFNDNYAVVMCRN 182
             AP + L+  PY A   L + +E  A       +T + P       + +D  A+VM R 
Sbjct: 123 HEAPGIDLRFEPYRA--DLRERMESGALDFAFALATTDLPPGAVSMPIADDRIALVMRRG 180

Query: 183 HPLANQPITLESYCQSRHVIISGNGLGKTDMDHELKKLNYQREVVASLPHFSMVPELLIN 242
           HP AN+   +  Y    HV I+    G++++D  L      R V    PHF+     +  
Sbjct: 181 HPKANRIWRISDYADVDHVGIALLDDGRSELDGILAAARVSRRVALVTPHFTAALATVAA 240

Query: 243 TDLIATLPRRLVTHLGQRYEITVADLPFYTADFRVEQFWHLIHHSSPIHQWVR---QEIK 299
           TD++ T+ R L       +++ V   PF   +  +   W  + ++ P+  W R   +E+ 
Sbjct: 241 TDMVTTISRALARRFAGAFDLIVKQPPFDKVELPMTLVWSHLRNADPLLIWFRGLLREVA 300

Query: 300 NLVYEE 305
              Y E
Sbjct: 301 GPAYAE 306