Pairwise Alignments

Query, 309 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  127 bits (320), Expect = 2e-34
 Identities = 77/298 (25%), Positives = 137/298 (45%), Gaps = 5/298 (1%)

Query: 6   INLRSIDLNLLTILEKLLIHKHISQAAQALNMSQPAVSRALMRLREQFGDPLLVKVKNEY 65
           + L+++DLNL  + + +   +++++AA+ L ++QPAVS AL RLR    DPL ++     
Sbjct: 1   MRLQNVDLNLFVVFDAIYTERNLTRAAERLCITQPAVSNALSRLRTSLNDPLFIRTPKAM 60

Query: 66  RLTAKGERLCSELERTLNTIRH-MLVDDKFDPMHYSGVFTIGALDFEMMMIVPKLLARFQ 124
             T   E +  ++   L  +   M + D FDP+     F +G  D     ++P LLA  Q
Sbjct: 61  MPTPVAENMIGQVREALKLLSSSMHLGDSFDPLLAEHHFQLGMFDVTEETMLPSLLAALQ 120

Query: 125 QRAPNLKLQIVPYNAYMPLHDYLEKVADLLLYSTDESPTNVFKQRLFNDNYAVVMCRNHP 184
             AP L +   P +    L +++    DL + +   +  +++   L    Y  ++ ++HP
Sbjct: 121 VHAPRLSISSYPVSREEMLKEFVSGRLDLAIDAPIVTHPDLYHHPLVTVPYVCLVRKDHP 180

Query: 185 LANQPITLESYCQSRHVIISGNGLGKTDMDHELKKLNYQREVVASLPHFSMVPELLINTD 244
                ++LE Y    HV +S    G   +D  L +L   R +     H    P+L+  T+
Sbjct: 181 EVGDTLSLEQYLALSHVHVSSRRQGVGYVDAALNRLGKHRNIQVRTKHHQAAPKLVAETN 240

Query: 245 LIATLPRRLVTHLGQRYEITVADLPFYTADFRVEQFWHLIHHSSPIHQWVRQEIKNLV 302
           L  T+P      L +  ++ V  LPF         +WH        ++W+R+ I  L+
Sbjct: 241 LATTVPE----SLAKNTDLKVLKLPFEVEPIEWHLYWHRSADQDNANRWLREFITALM 294