Pairwise Alignments

Query, 344 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 339 a.a., Ribose operon repressor from Pseudomonas fluorescens FW300-N2E2

 Score =  180 bits (456), Expect = 5e-50
 Identities = 113/333 (33%), Positives = 182/333 (54%), Gaps = 2/333 (0%)

Query: 10  MATINDVCKLAGVSKATVSRVLNETGQVKAQTREAVLAAMQQLGYQPNSLAQALATNTTN 69
           MATI DV  LAG+S  TVS V+N+T  V  + R  V AA+++L Y P+++A++L   TT 
Sbjct: 1   MATIKDVAALAGISYTTVSHVVNKTRPVSEEVRLKVEAAIERLDYVPSAVARSLKAKTTA 60

Query: 70  SIGLVLPHFESSYFGSILFEAEQGAQKAGKKLLVMNSKNSEQGEKEAVATLAAQRCDAIL 129
           +IGL++P+  + YF  +    E   ++ G  +++ NS ++   ++  +  L  +R D  L
Sbjct: 61  TIGLLVPNSLNPYFAELARGIEDYCERNGYCVILCNSDDNPDKQRSYLRVLLEKRIDG-L 119

Query: 130 LYSRHLNEVQLLELQQQHPSPLVILNRRLHHPQLHSFGLDQTQIAQLAMQHLLNLGHRQI 189
           +++    +V L E      +P+VI++R L         +D    A LA +HLL LGHR I
Sbjct: 120 IFASAGGDVGLAEGLSNVRTPMVIVDRGLEGVDADLVRIDHEYGAYLATRHLLELGHRDI 179

Query: 190 ACITSPLVSETGKIRYQVYQQALHEQGIELSSSLVIEGDNTLLGGYQAMQQLLQQGISMT 249
           A I  P  +   ++R   Y +AL E GIEL    ++E D T  GGY+A  QLL Q    +
Sbjct: 180 AFIGGPANTSVAQMRLAGYCRALKEAGIELPVERMLESDFTSTGGYRAAAQLLVQQ-PPS 238

Query: 250 AVFACNDDMALGAMRAMHEHGIHVPKQVSIIGIDNEPAAAFAIPSLSSVSLPIGELTQQA 309
           A+FA ND + +G +RA  E  + VP ++S+IG D+   + +  P+L++V   I +L + A
Sbjct: 239 AIFAANDMIGIGVLRAAAERNVRVPSELSVIGFDDIQMSRYVYPALTTVGQSILQLGEMA 298

Query: 310 ISLAVEIANKKPQDAQHRLYQGSLIARESTIAL 342
             + +          + R+   S++ REST  L
Sbjct: 299 AEVLLRRIATPGLATEQRIVTPSIVLRESTAPL 331