Pairwise Alignments

Query, 393 a.a., sn-glycerol-3-phosphate import ATP-binding protein UgpC from Vibrio cholerae E7946 ATCC 55056

Subject, 390 a.a., ABC-type sugar transport systems, ATPase components from Pseudomonas stutzeri RCH2

 Score =  320 bits (819), Expect = 6e-92
 Identities = 183/378 (48%), Positives = 243/378 (64%), Gaps = 16/378 (4%)

Query: 23  LDIKQLVKTYDNGHQA-VKGVDLSIHQGEFIVLVGPSGCGKSSILRSIAGLESITSGEIH 81
           L+++ + K+Y N   A +K + L I  GEF++LVGPSGCGKS+++  IAGLE+IT GEI 
Sbjct: 4   LELRNVQKSYGNSQIATLKDIALKIDAGEFLILVGPSGCGKSTLMNCIAGLENITGGEIL 63

Query: 82  LAGRRVDNEKPANRDIAMVFQNYALYPHMSVYDNLAYGLKNRGVDKQTIAAKIAKVAKTL 141
           + G  +    P +RDIAMVFQ+YALYP MSV DN+A+GLK R V    I  ++A+VAK L
Sbjct: 64  VDGEDISQASPKDRDIAMVFQSYALYPTMSVRDNIAFGLKMRKVPAAKIEEEVARVAKLL 123

Query: 142 KIEEYLDRKPAKLSGGQRQRVAMGRAIVRDPQLFLFDEPLSNLDAALRAHMRLEIKKLQR 201
           +IE  L+RKP++LSGGQ+QRVAMGRA+ R P+++LFDEPLSNLDA LR  MR EIK + +
Sbjct: 124 QIEPLLERKPSQLSGGQQQRVAMGRALARRPKIYLFDEPLSNLDAKLRVEMRTEIKLMHQ 183

Query: 202 ELGVTSVYVTHDQVEAMTLADRIVVVKQGEIEQVGTPAEVYHQPASTFVASFIGSPAMNF 261
            L  T+VYVTHDQ+EAMTL D++ V+K G I+Q GTP E+Y+ PA+ FVASFIGSP MNF
Sbjct: 184 RLKTTTVYVTHDQIEAMTLGDKVAVMKDGVIQQFGTPHEIYNNPANLFVASFIGSPPMNF 243

Query: 262 LPASIKQ------GQLHIAGKHCYLP----QFDAMSSENITLGIRPEHASLHPLTNA-IE 310
           +P  I+Q      G L+     C LP      D +    + LGIRPE   L P  +A   
Sbjct: 244 VPLRIRQRDGRWVGVLNSEQGSCELPLPITSDDGLRDRELILGIRPEQIGLAPAGSADFS 303

Query: 311 LKLDIQVVEPLGPNQLVHGKIIGLESEQDFIAVTAEIPLDVHQTLPIWVALEQLHLFD-Q 369
           L +DI+VVEP GP+ LV   +  L   +    +  +    V +TL +     +  LFD Q
Sbjct: 304 LAVDIEVVEPTGPDTLV---VFTLNQVKACCRLAPDQAPRVGETLNLQFDPRRALLFDAQ 360

Query: 370 QGKRFVQSHRSCTQSSKV 387
            G+R         + SKV
Sbjct: 361 TGERLGVVQPEPVRESKV 378