Pairwise Alignments

Query, 393 a.a., sn-glycerol-3-phosphate import ATP-binding protein UgpC from Vibrio cholerae E7946 ATCC 55056

Subject, 365 a.a., ABC transporter for L-Fucose, ATPase component (from data) from Sinorhizobium meliloti 1021

 Score =  300 bits (769), Expect = 3e-86
 Identities = 172/365 (47%), Positives = 240/365 (65%), Gaps = 17/365 (4%)

Query: 25  IKQLVKTYDNGHQAVKGVDLSIHQGEFIVLVGPSGCGKSSILRSIAGLESITSGEIHLAG 84
           +K+LVK Y    + V G+DL +   EFI LVGPSGCGKS+ LR IAGLE ++ G I + G
Sbjct: 6   LKKLVKRY-GALEVVHGIDLEVKDREFIALVGPSGCGKSTTLRMIAGLEEVSGGAIEIGG 64

Query: 85  RRVDNEKPANRDIAMVFQNYALYPHMSVYDNLAYGLKNRGVDKQTIAAKIAKVAKTLKIE 144
           R+V++  P  R+I+MVFQ+YALYPHM+V +N+ + LK  G   + I  ++A+ A  L + 
Sbjct: 65  RKVNDLPPRARNISMVFQSYALYPHMTVAENMGFSLKIAGRPAEEIKTRVAEAAAILDLA 124

Query: 145 EYLDRKPAKLSGGQRQRVAMGRAIVRDPQLFLFDEPLSNLDAALRAHMRLEIKKLQRELG 204
             L+R+P++LSGGQRQRVAMGRAIVR P +FLFDEPLSNLDA LR  +R EIKKL   + 
Sbjct: 125 HLLERRPSQLSGGQRQRVAMGRAIVRQPDVFLFDEPLSNLDAKLRTQVRTEIKKLHARMQ 184

Query: 205 VTSVYVTHDQVEAMTLADRIVVVKQGEIEQVGTPAEVYHQPASTFVASFIGSPAMNFLPA 264
            T +YVTHDQVEAMTL+DRIV+++ G IEQVGTP +V+ +PA+ FVA FIGSP MN   A
Sbjct: 185 ATMIYVTHDQVEAMTLSDRIVIMRDGHIEQVGTPEDVFRRPATKFVAGFIGSPPMNMEEA 244

Query: 265 SIKQGQLHIA-GKHCYL-PQFDAM--SSENITLGIRPE--HASLHPL----TNAI-ELKL 313
            +  G+L  A G    L P+F ++    + +T G+RP+  + S H L     +A+ E++L
Sbjct: 245 VLTDGKLAFASGATLPLPPRFRSLVREGQKVTFGLRPDDVYPSGHGLHAGDADAVHEIEL 304

Query: 314 DIQVVEPLGPNQLVHGKIIGLESEQDFIA-VTAEIPLDVHQTLPIWVALEQLHLFDQQGK 372
            + + EPLG   LV  +  G    +D+++ +    PL   + +P+   L + HLFD +  
Sbjct: 305 PVTITEPLGNETLVFTQFNG----RDWVSRMLNPRPLRPGEAVPMSFDLARAHLFDGETG 360

Query: 373 RFVQS 377
           R + S
Sbjct: 361 RALAS 365