Pairwise Alignments

Query, 393 a.a., sn-glycerol-3-phosphate import ATP-binding protein UgpC from Vibrio cholerae E7946 ATCC 55056

Subject, 372 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

 Score =  309 bits (791), Expect = 1e-88
 Identities = 168/362 (46%), Positives = 227/362 (62%), Gaps = 21/362 (5%)

Query: 23  LDIKQLVKTYDNGHQAVKGVDLSIHQGEFIVLVGPSGCGKSSILRSIAGLESITSGEIHL 82
           +D++ L K Y      V+ ++L I  GEF++ +GPSGCGKS+ LR IAGLE++TSGE+ +
Sbjct: 4   IDLRNLSKAYGPTPPVVRAINLEIADGEFMIFLGPSGCGKSTTLRMIAGLETVTSGEVRI 63

Query: 83  AGRRVDNEKPANRDIAMVFQNYALYPHMSVYDNLAYGLKNRGVDKQTIAAKIAKVAKTLK 142
            G  V++  PA RD+A+VFQNYALYPHMSV  NLA+GL+ R + +  I  +I  V + L 
Sbjct: 64  DGAVVNDLDPAKRDLAIVFQNYALYPHMSVRKNLAFGLRLRHIPEAEITRRIQDVGEILG 123

Query: 143 IEEYLDRKPAKLSGGQRQRVAMGRAIVRDPQLFLFDEPLSNLDAALRAHMRLEIKKLQRE 202
           + + LDR+PA LSGGQRQRVA+GRA+VR+P+ FL DEPLSNLDA LRA MR E+ KL R 
Sbjct: 124 LSQLLDRRPAHLSGGQRQRVALGRALVREPKAFLLDEPLSNLDAKLRASMRTELIKLHRR 183

Query: 203 LGVTSVYVTHDQVEAMTLADRIVVVKQGEIEQVGTPAEVYHQPASTFVASFIGSPAMNFL 262
           LG T ++VTHDQVEAMT+  RI +++ GEI QVG P EVY  PA+ FVA F+ +P MN L
Sbjct: 184 LGTTMIHVTHDQVEAMTMGQRICIMRDGEIMQVGAPLEVYRNPANLFVADFLATPPMNLL 243

Query: 263 PASIK---------QGQLHIAGKHCYLPQFDAMSSENITLGIRPEHASLHPLTN-----A 308
           P  ++          G L +     Y P +  +S   + LG+RPE    HP        A
Sbjct: 244 PGRLEAVGEDLVAVAGALRLPIPPAYRPAYAPLSGREVVLGLRPE--DFHPDARRAGPLA 301

Query: 309 IELKLDIQVVEPLGPNQLVHGKIIGLESEQDFIAVTAEIPLDVH--QTLPIWVALEQLHL 366
             L L ++ VE LGP Q++  ++ G   +   IAV  E  L +     L +     ++HL
Sbjct: 302 AGLSLTVETVEALGPEQILVSRVDGCAKD---IAVRTESALAIRPGARLDLSYDTTKIHL 358

Query: 367 FD 368
           FD
Sbjct: 359 FD 360