Pairwise Alignments

Query, 393 a.a., sn-glycerol-3-phosphate import ATP-binding protein UgpC from Vibrio cholerae E7946 ATCC 55056

Subject, 333 a.a., ABC transporter related (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  316 bits (809), Expect = 7e-91
 Identities = 179/342 (52%), Positives = 222/342 (64%), Gaps = 30/342 (8%)

Query: 39  VKGVDLSIHQGEFIVLVGPSGCGKSSILRSIAGLESITSGEIHLAGRRVDNEKPANRDIA 98
           + GV + + +GEFIV+VGPSGCGKS++LR +AGLE+++SGE+ + GR V+  +P +RDIA
Sbjct: 19  IHGVSIDVTEGEFIVIVGPSGCGKSTLLRMVAGLETVSSGEVRIDGRVVNTLEPMDRDIA 78

Query: 99  MVFQNYALYPHMSVYDNLAYGLKNRGVDKQTIAAKIAKVAKTLKIEEYLDRKPAKLSGGQ 158
           MVFQNYALYPHMSV+DN+AYGLK   V K  IA ++A  AK L++E YL RKP +LSGGQ
Sbjct: 79  MVFQNYALYPHMSVFDNMAYGLKIAKVPKAEIADRVAVAAKLLQLEPYLGRKPKELSGGQ 138

Query: 159 RQRVAMGRAIVRDPQLFLFDEPLSNLDAALRAHMRLEIKKLQRELGVTSVYVTHDQVEAM 218
           RQRVAMGRAIVR P +FLFDEPLSNLDA LR  MRLEIK LQRELGVTS+YVTHDQVEAM
Sbjct: 139 RQRVAMGRAIVRKPAVFLFDEPLSNLDAKLRVQMRLEIKALQRELGVTSLYVTHDQVEAM 198

Query: 219 TLADRIVVVKQGEIEQVGTPAEVYHQPASTFVASFIGSPAMNFLPAS-IKQGQLHIAGKH 277
           TLADR++V+  G  +Q+G P EVY  P + FVA FIGSP  NFLPA  ++ G    AG+ 
Sbjct: 199 TLADRMIVMNGGVADQIGAPLEVYANPQTAFVAGFIGSPPTNFLPADMVRAGP---AGQQ 255

Query: 278 CYLPQFDAMSSENITLGIRPEHASLHPLTNAIELKLDIQVVEPLGPNQLVHGKIIGLESE 337
                          +GIRPEH  + P      L+  +   E LG   L+H     L + 
Sbjct: 256 ---------------VGIRPEHLRVAPQG---RLEAHVAYAEALGAETLLH-----LRAS 292

Query: 338 QDFIAVTAEIPLDVHQTLPIWVALEQLHLFDQQGKRFVQSHR 379
           Q     T  +  D    +P   A  QL   D     F  + R
Sbjct: 293 Q---GTTLTVRQDAAAPMPAEGATVQLDWDDSDTMLFADNGR 331