Pairwise Alignments

Query, 280 a.a., sn-glycerol-3-phosphate ABC transporter permease UgpE from Vibrio cholerae E7946 ATCC 55056

Subject, 281 a.a., Glucose ABC transport system, inner membrane component 2 from Pseudomonas fluorescens FW300-N2E2

 Score =  101 bits (252), Expect = 2e-26
 Identities = 74/279 (26%), Positives = 136/279 (48%), Gaps = 24/279 (8%)

Query: 4   NRLSDHLILIAGALFMLVPLWLIFASSTHQPNTIVSEGL-QW-TLGDNLSAVYREAWNKS 61
           +R++ + +LI   L  LVPL ++  +S   P  I +  L  W T+   +  V  +AW   
Sbjct: 13  SRIAIYAVLILAVLLYLVPLVVMLLTSFKTPEDISTGNLLSWPTVVSGIGWV--KAWATV 70

Query: 62  LGFAGN---VTAQTMIVNSMIMGLGFAIGKIVISMMAAYALVYFRLPYASAWFWLIFITL 118
            G+  N   +T   +++++ I  L              Y L  +R   +  +F L+    
Sbjct: 71  DGYFWNSIKITVPAVLISTAIGALN------------GYVLSMWRFRGSQLFFGLLLFGC 118

Query: 119 LLPLEVRIIPSYEVVSNLGMLNSYTGLVLPLIASATA--TFFFRQFFKTIPDELLEAAQL 176
            LP +  ++P+   +  +G+ ++ TGLV   +    A  T FFR ++ +IPD L++AA+L
Sbjct: 119 FLPFQTVLLPASFTLGKMGLASTTTGLVFVHVVYGLAFTTLFFRNYYVSIPDALVKAARL 178

Query: 177 DNAGPIRFFIDILFPLSKTMMAAIFIIMFVVGWNQYLWPIMMTTDEQYNTIVMGIKQILN 236
           D AG    F  I+ P+S  ++    I  F   WN +L+ ++ ++ +    I + +  ++N
Sbjct: 179 DGAGFFTIFRRIILPMSTPIIMVCLIWQFTQIWNDFLFGVVFSSGDS-QPITVALNNLVN 237

Query: 237 NINETSLPRYDYAFAMVILAMLPPVLVVVIFQRWFVKGL 275
               T    Y+   A  ++A LP +LV V+  ++FV+GL
Sbjct: 238 --TSTGAKEYNVDMAAAMIAGLPTLLVYVVAGKYFVRGL 274