Pairwise Alignments

Query, 280 a.a., sn-glycerol-3-phosphate ABC transporter permease UgpE from Vibrio cholerae E7946 ATCC 55056

Subject, 281 a.a., sugar ABC transporter permease from Pseudomonas fluorescens FW300-N2E3

 Score =  102 bits (253), Expect = 1e-26
 Identities = 75/279 (26%), Positives = 136/279 (48%), Gaps = 24/279 (8%)

Query: 4   NRLSDHLILIAGALFMLVPLWLIFASSTHQPNTIVSEGL-QWT-LGDNLSAVYREAWNKS 61
           +R++ +  L+  A   L+PL ++  +S   P  I +  L  W  + D +  +  +AW+  
Sbjct: 13  SRIAIYATLLLAAAVYLIPLVVMLLTSFKSPEDIRTGNLLSWPQVIDGIGWI--KAWDVV 70

Query: 62  LGFAGN---VTAQTMIVNSMIMGLGFAIGKIVISMMAAYALVYFRLPYASAWFWLIFITL 118
            G+  N   +T   +++++ I              M  Y L  +R   +  +F L+    
Sbjct: 71  GGYFWNSVKITVPAVLISTFI------------GAMNGYVLSMWRFRGSQLFFGLLLFGC 118

Query: 119 LLPLEVRIIPSYEVVSNLGMLNSYTGLVLPLIASATA--TFFFRQFFKTIPDELLEAAQL 176
            LP +  ++P+   V  LG+ N+ TGLVL  I    A  T FFR ++ +IPD L++AA+L
Sbjct: 119 FLPFQTVLLPASFTVGKLGLANTTTGLVLVHIVYGLAFTTLFFRNYYVSIPDALVKAARL 178

Query: 177 DNAGPIRFFIDILFPLSKTMMAAIFIIMFVVGWNQYLWPIMMTTDEQYNTIVMGIKQILN 236
           D AG    F  IL P+S  ++    I  F   WN +L+ ++  + +    I + +  ++N
Sbjct: 179 DGAGFFTIFGKILLPMSIPIVMVCLIWQFTQIWNDFLFGVVFASGDA-QPITVALNNLVN 237

Query: 237 NINETSLPRYDYAFAMVILAMLPPVLVVVIFQRWFVKGL 275
               T +  Y+   A  ++A LP +LV +   ++F++GL
Sbjct: 238 --TSTGVKEYNVDMAAAMIAGLPTLLVYIFAGKYFLRGL 274