Pairwise Alignments

Query, 280 a.a., sn-glycerol-3-phosphate ABC transporter permease UgpE from Vibrio cholerae E7946 ATCC 55056

Subject, 280 a.a., ABC-type sugar transport system, permease component from Pseudomonas stutzeri RCH2

 Score =  100 bits (249), Expect = 4e-26
 Identities = 73/277 (26%), Positives = 130/277 (46%), Gaps = 22/277 (7%)

Query: 5   RLSDHLILIAGALFMLVPLWLIFASSTHQPNTIVSEGLQWTLGDNLSAVYREAWNKSLGF 64
           RL+ +  L+      LVPL ++  +S   P  I +  L              +W ++   
Sbjct: 13  RLTIYATLLLACAVYLVPLIVMLLTSFKTPEDIRTGNLL-------------SWPEAFSA 59

Query: 65  AGNVTAQTMIVNSMIMGLGFAIGKIVISM----MAAYALVYFRLPYASAWFWLIFITLLL 120
            G +TA   I       +   I  ++IS     +  Y L  +R   +  +F L+     L
Sbjct: 60  MGWLTAWDSIGGYFWNSVKIVIPAVLISTALGALNGYVLSMWRFRGSQLFFGLLLFGCFL 119

Query: 121 PLEVRIIPSYEVVSNLGMLNSYTGLVLPLIASATA--TFFFRQFFKTIPDELLEAAQLDN 178
           P +V ++P+   +  LG+ N+ TGLVL  +    A  T FFR F+ ++PD L+ AA+LD 
Sbjct: 120 PFQVILLPASFTLGKLGLANTTTGLVLVHVVYGLAFTTLFFRNFYVSVPDALVRAARLDG 179

Query: 179 AGPIRFFIDILFPLSKTMMAAIFIIMFVVGWNQYLWPIMMTTDEQYNTIVMGIKQILNNI 238
           AG    F  IL P+S  ++    I  F   WN +L+ ++  + +    + + +  ++N  
Sbjct: 180 AGFFTIFGRILLPMSVPIIMVCLIWQFTQIWNDFLFGVVFASGDT-QPVTVALNNLVN-- 236

Query: 239 NETSLPRYDYAFAMVILAMLPPVLVVVIFQRWFVKGL 275
             T   +Y+   A  ++A LP ++V V+  ++F++GL
Sbjct: 237 TSTGAKQYNVDMAAAMIAGLPTLVVYVVAGKYFLRGL 273