Pairwise Alignments

Query, 280 a.a., sn-glycerol-3-phosphate ABC transporter permease UgpE from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., carbohydrate ABC transporter membrane protein 2, CUT1 family from Pseudomonas syringae pv. syringae B728a

 Score =  216 bits (550), Expect = 5e-61
 Identities = 120/300 (40%), Positives = 177/300 (59%), Gaps = 32/300 (10%)

Query: 1   MKSNRLSD---HLILIAGALFMLVPLWLIFASSTHQPNTIVSEGLQWTLGDNLSAVYREA 57
           ++ NRL +   +L+L  G +F L PL++   S+T     + + GL    GD L    +  
Sbjct: 2   IEHNRLFNAGAYLLLTLGLVFALGPLYIAVCSATVSNPQLFAHGLAVIPGDQLLENLQRV 61

Query: 58  WNKSLGFAGNVTAQTMIVNSMIMGLGFAIGKIVISMMAAYALVYFRLPYASAWFWLIFIT 117
             +       +    ++ NS+++     IGK+ +S + A+A+VYFR  Y+S  F+ +   
Sbjct: 62  SRR-------LDLLRLLGNSLLVATLVVIGKLALSALTAFAVVYFRSRYSSVMFFAVLGA 114

Query: 118 LLLPLEVRIIPSYEVVSNL---------------------GMLNSYTGLVLPLIASATAT 156
           LLLPLEVRIIP+Y V S+L                      +L+SY GL LPLIASAT T
Sbjct: 115 LLLPLEVRIIPTYAVASDLLGPVRSLLHWLGIQWLPLPTINLLDSYPGLALPLIASATGT 174

Query: 157 FFFRQFFKTIPDELLEAAQLDNAGPIRFFIDILFPLSKTMMAAIFIIMFVVGWNQYLWPI 216
           F FRQF++T+P EL+EAA++D AGP RFFIDIL PLSKT  AA+  ++F+  W  YLWP+
Sbjct: 175 FLFRQFYQTLPAELVEAARMDGAGPWRFFIDILLPLSKTNFAALGTLVFIGAWKDYLWPL 234

Query: 217 MMTTDEQYNTIVMGIKQILNNINETSLPRYDYAFAMVILAMLPPVLVVVIFQRWFVKGLV 276
           + T  E   T+V+G+   L   + T +P ++   A  +++MLPP+LV+ + QRWFVKGL+
Sbjct: 235 VATNREDMRTLVLGVASFLPT-DATQVPEWNLLMAAAVVSMLPPILVIALMQRWFVKGLI 293