Pairwise Alignments

Query, 280 a.a., sn-glycerol-3-phosphate ABC transporter permease UgpE from Vibrio cholerae E7946 ATCC 55056

Subject, 270 a.a., carbohydrate ABC transporter permease from Synechocystis sp000284455 PCC 6803

 Score =  109 bits (273), Expect = 6e-29
 Identities = 71/268 (26%), Positives = 136/268 (50%), Gaps = 18/268 (6%)

Query: 9   HLILIAGALFMLVPLWLIFASSTHQPNTIVSEGLQWTLG--DNLSAVYREAWNKSLGFAG 66
           +L+L+  A+ ML+PL  + A++   P   V  GL   L    NL   + + W +   F G
Sbjct: 7   YLVLVLLAIAMLLPLLWLVATALKAPTEDVFGGLGQLLPRQPNLGN-FIKVW-QDYPF-G 63

Query: 67  NVTAQTMIVNSMIMGLGFAIGKIVISMMAAYALVYFRLPYASAWFWLIFITLLLPLEVRI 126
                +++V+S+ + L      +    +AAY L              I  TL++P ++ +
Sbjct: 64  RYLFNSVVVSSITVALN-----LFFCALAAYPLARLNFVGRDMTLAAIVATLMIPFQLIM 118

Query: 127 IPSYEVVSNLGMLNSYTGLVLPLIASATATFFFRQFFKTIPDELLEAAQLDNAGPIRFFI 186
           IP Y +  NLG+ NSY G++ P +ASA   F  RQ F+ +P EL EA ++D    +  + 
Sbjct: 119 IPLYILAVNLGLRNSYVGIIFPSLASAFGIFLLRQAFQGVPKELEEAGRIDGCRELGIWW 178

Query: 187 DILFPLSKTMMAAIFIIMFVVGWNQYLWPIMMTTDEQYNTIVMGIKQILNNINETSLPRY 246
            I+ P  +  +  + I +F+  W+ +LWP+++    +Y T+ +G+ Q+ + ++      +
Sbjct: 179 HIMIPAIRPALVTLAIFVFIGAWSDFLWPLIVLDQPEYYTLPLGVAQLSSALD------F 232

Query: 247 DYAF--AMVILAMLPPVLVVVIFQRWFV 272
           D+    A  ++A+ P +++ +  QR+ +
Sbjct: 233 DWRLIAAASVIAIAPIIVLFLFVQRYII 260