Pairwise Alignments

Query, 280 a.a., sn-glycerol-3-phosphate ABC transporter permease UgpE from Vibrio cholerae E7946 ATCC 55056

Subject, 279 a.a., ABC transporter for N-Acetyl-D-glucosamine, permease protein 2 (from data) from Sinorhizobium meliloti 1021

 Score = 88.6 bits (218), Expect = 1e-22
 Identities = 61/269 (22%), Positives = 121/269 (44%), Gaps = 12/269 (4%)

Query: 9   HLILIAGALFMLVPLWLIFASSTHQPNTIVSEGLQWTLGDNLSAVYREAWNKSLGFAGNV 68
           H  LIA  L  L P++L   +S    N I  E L     +  S +  E   K   F G  
Sbjct: 15  HAALIAYTLIALFPVFLTIVNSFKSRNAIFREPLAVPTPETFSLIGYETVLKQGDFIG-- 72

Query: 69  TAQTMIVNSMIMGLGFAIGKIVISMMAAYALVYFRLPYASAWFWLIFITLLLPLEVRIIP 128
                  NS+I+ +      ++   MAA+AL  +R    +     + + +++P+ +  + 
Sbjct: 73  ----YFQNSIIVTVVSIALVLLFGAMAAFALSEYRFRGNTLMGLYLALGIMIPIRLGTVA 128

Query: 129 SYEVVSNLGMLNSYTGLVLPLIASAT--ATFFFRQFFKTIPDELLEAAQLDNAGPIRFFI 186
             + +   G++N+ T L+L   A     A F   +F +T+ D+L  A ++D       F+
Sbjct: 129 ILQGMVATGLVNTLTALILVYTAQGLPLAVFILSEFMRTVSDDLKNAGRIDGLSEYAIFL 188

Query: 187 DILFPLSKTMMAAIFIIMFVVGWNQYLWPIMMTTDEQYNTIVMGIKQILNNINETSLPRY 246
            ++ PL +  MA + +   +  WN   +P+++   E   T+ +G +  +       +  +
Sbjct: 189 RLVLPLIRPAMATVAVFTMIPIWNDLWFPLILAPAEATKTVTLGSQIFIGQF----VTNW 244

Query: 247 DYAFAMVILAMLPPVLVVVIFQRWFVKGL 275
           +   + + LA+ P +++ VIF R  ++G+
Sbjct: 245 NAVLSALSLAIFPVLVLYVIFSRQLIRGI 273