Pairwise Alignments

Query, 280 a.a., sn-glycerol-3-phosphate ABC transporter permease UgpE from Vibrio cholerae E7946 ATCC 55056

Subject, 312 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  107 bits (266), Expect = 4e-28
 Identities = 72/275 (26%), Positives = 130/275 (47%), Gaps = 9/275 (3%)

Query: 5   RLSDHLILIAGALFMLVPLWLIFASSTHQPNTIVSEGLQWTLGDNLSAVYREAWNKSLGF 64
           R+  + +L+  AL+ L+PL+++  +S    + I +  L           + +AW+ +   
Sbjct: 36  RIGLYAVLVLFALYYLLPLFVMLLTSVKTLDDIRAGSLIALPRTLTFEPWLKAWDSACVG 95

Query: 65  AGNVTAQTMIVNSMIMGLGFAIGKIVISMMAAYALVYFRLPYASAWFWLIFITLLLPLEV 124
                 +   +NS+++ +       V+  +  YAL  +R P +   F L+     +P +V
Sbjct: 96  VQCAGLKPYFLNSLLLVVPAVAISTVLGALNGYALTKWRFPGSQLIFALMLFGCFIPFQV 155

Query: 125 RIIPSYEVVSNLGMLNSYTGLVLPLIASATA--TFFFRQFFKTIPDELLEAAQLDNAGPI 182
            ++P   V+   G+  S  GL+L  +    +  T FFR F+ T+PDEL+ AA +D AG  
Sbjct: 156 VLLPMARVLGLAGLAGSIQGLILVHVVYGLSFTTLFFRNFYMTVPDELVRAATIDGAGFF 215

Query: 183 RFFIDILFPLSKTMMAAIFIIMFVVGWNQYLWPIMMTTDEQYNTIVMGIKQILNNI--NE 240
           R F  IL P+S  ++    I  F   +N +L+ +  T        V      LNN+  + 
Sbjct: 216 RIFFSILLPMSPPIIVVTIIWQFTQIYNDFLFGVSFTVSGGQPVTV-----ALNNLVASS 270

Query: 241 TSLPRYDYAFAMVILAMLPPVLVVVIFQRWFVKGL 275
           T +  Y+   A  IL  LP ++V  +  ++F++GL
Sbjct: 271 TGVKEYNVDMAAAILTALPTLVVYAVAGKYFIRGL 305