Pairwise Alignments

Query, 280 a.a., sn-glycerol-3-phosphate ABC transporter permease UgpE from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., carbohydrate ABC transporter permease from Rahnella sp. WP5

 Score =  103 bits (256), Expect = 6e-27
 Identities = 69/274 (25%), Positives = 134/274 (48%), Gaps = 12/274 (4%)

Query: 9   HLILIAGALFMLVP-LWLIFASSTHQPNTIVSEGLQWTLG-DNLSAVYREAWNKSLGFAG 66
           HL++ A A+  L P LW++  S  +  +   +      L  DN   ++        G A 
Sbjct: 30  HLLMFALAITWLYPYLWMLIGSFKNTADIYTTSLFSGPLSFDNYIFLF-----DGTGKAE 84

Query: 67  NVTAQTMIVNSMIMGLGFAIGKIVISMMAAYALVYFRLPYASAWFWLIFITLLLPLEVRI 126
               +T+  NS+ +     +   + S +  YAL          +  L+ + ++ P  + I
Sbjct: 85  KPFLRTLF-NSIFITSTITVCVTLSSCLIGYALAKMEFKGRDIFKNLLILQMVFPAFMFI 143

Query: 127 IPSYEVVSNLGMLNSYTGLVLPLIASATATFFFRQFFKTIPDELLEAAQLDNAGPIRFFI 186
           IP + ++  LGM+NSY  L+LP + +    F   Q FK  P++ + AA+LD+AG I+  +
Sbjct: 144 IPHFVLMRELGMINSYGALILPFVMNGWGIFMISQSFKGTPNDYIHAARLDHAGLIKILL 203

Query: 187 DILFPLSKTMMAAIFIIMFVVGWNQYLWPIMMTTDEQYNTIVMGIKQILNNINETSLPRY 246
            ++ PL+K+++A + I  F   W+ +LWP+++  D       M +  +L   +++     
Sbjct: 204 HVMLPLNKSILAIVAIFTFTSAWDNFLWPLIVMQDAN----KMPLSVLLATFSKSYGIYV 259

Query: 247 DYAFAMVILAMLPPVLVVVIFQRWFVKGLVESEK 280
               A  ++  LP V++ ++F++ F++G+  S K
Sbjct: 260 GPVLAGSVVQTLPIVVLFILFRKHFLEGMSLSLK 293