Pairwise Alignments

Query, 280 a.a., sn-glycerol-3-phosphate ABC transporter permease UgpE from Vibrio cholerae E7946 ATCC 55056

Subject, 271 a.a., carbohydrate ABC transporter permease from Rahnella sp. WP5

 Score =  110 bits (274), Expect = 4e-29
 Identities = 61/208 (29%), Positives = 115/208 (55%), Gaps = 11/208 (5%)

Query: 75  VNSMIMGLGFAIGKIVISMMAAYALVYFRLPYASAWFWLIFITLLLPLEVRIIPSYEVVS 134
           +N+ ++ +   + +++++ +AAYALV F+L  A   F LI + L++  +V I+ +Y+ + 
Sbjct: 68  MNTTLLVMMIVVCQLILATLAAYALVRFKLKGAGFIFALILLQLMISPDVLILNNYKTIG 127

Query: 135 NLGMLNSYTGLVLPLIASATATFFFRQFFKTIPDELLEAAQLDNAGPIRFFIDILFPLSK 194
            LG+ ++  G+ LP  ASA A F  RQ FK+IP  L EAA ++ A        I  PL+K
Sbjct: 128 ALGLRDTLAGIALPYFASAFAIFLLRQTFKSIPLVLEEAAIVEGASRFYILRKIYIPLAK 187

Query: 195 TMMAAIFIIMFVVGWNQYLWPIMMTTDEQYNTIVMGIKQILNNINETSLPRYDYAFAMV- 253
            +  A  ++     WN +LWP+++T   +   + +G++         S P     +A++ 
Sbjct: 188 PIYVAFALVSISFHWNDFLWPLVITDSVKVRPVTVGLQLF-------SAPEQGVQWALIS 240

Query: 254 ---ILAMLPPVLVVVIFQRWFVKGLVES 278
              ++ +LP +++ +IFQR FV+  + +
Sbjct: 241 AATLMTVLPLLVLFLIFQRQFVQSFMRA 268