Pairwise Alignments

Query, 280 a.a., sn-glycerol-3-phosphate ABC transporter permease UgpE from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., ABC transporter, inner-membrane protein from Phaeobacter inhibens DSM 17395

 Score = 94.7 bits (234), Expect = 2e-24
 Identities = 66/274 (24%), Positives = 123/274 (44%), Gaps = 7/274 (2%)

Query: 5   RLSDHLILIAGALFMLVPLWLIFASSTH-QPNTIVSEGLQWTLGDNLSAVYREAWNKSLG 63
           R++ ++ L   A F L+P++++  +S    P   +   LQW    ++ A + +AW+ +  
Sbjct: 21  RIAIYVFLSVAAAFFLMPIYIVIVTSLKTMPEIRLGNVLQWPQTWSVDA-WIKAWDTACT 79

Query: 64  FAGNVTAQTMIVNSMIMGLGFAIGKIVISMMAAYALVYFRLPYASAWFWLIFITLLLPLE 123
                  +    NSM + L   +  I    +  Y L ++    A  +F ++     +P +
Sbjct: 80  GLQCEGIKVGFWNSMRILLPSLVVSITAGALCGYILTFWTFRGAEIFFAILLFGAFVPYQ 139

Query: 124 VRIIPSYEVVSNLGMLNSYTGLVL--PLIASATATFFFRQFFKTIPDELLEAAQLDNAGP 181
             I P   + S  G+  +  G+VL   +      T  FR ++ T+P E+ +AA++D AG 
Sbjct: 140 ALIFPMIRIFSATGLYGTLPGIVLVHTIFGLPIMTLIFRNYYSTLPSEIFKAARVDGAGF 199

Query: 182 IRFFIDILFPLSKTMMAAIFIIMFVVGWNQYLWPIMMTTDEQYNTIVMGIKQILNNINET 241
              F  +L P+S  ++    I+     WN YL  ++    E     V  +  I+N++   
Sbjct: 200 FSVFWYVLLPISTPIIVVAAILQVTGIWNDYLLGLIFGGRENMPMTVQ-LNNIVNSVRGG 258

Query: 242 SLPRYDYAFAMVILAMLPPVLVVVIFQRWFVKGL 275
               Y+   A  +L  L P+ V  +  RWFV+G+
Sbjct: 259 K--EYNVNMAATLLTALVPLTVYFVSGRWFVRGI 290