Pairwise Alignments

Query, 280 a.a., sn-glycerol-3-phosphate ABC transporter permease UgpE from Vibrio cholerae E7946 ATCC 55056

Subject, 277 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  102 bits (254), Expect = 9e-27
 Identities = 71/268 (26%), Positives = 134/268 (50%), Gaps = 17/268 (6%)

Query: 11  ILIAGALFMLVPLWLIFASSTHQPNTIVSEGLQWTLGDNLSAVYREAWNKSLGFAGNVTA 70
           + +  AL +L  +W  F  S       ++  L  TL DN    +R AW+ +  FA     
Sbjct: 24  LAVLWALPLLYAVWTAFHPSEFSTRFTLAAPL--TL-DN----FRAAWDAA-PFA----- 70

Query: 71  QTMIVNSMIMGLGFAIGKIVISMMAAYALVYFRLPYASAWFWLIFITLLLPLEVRIIPSY 130
              +VN++++      G++V+  +AAYA   +  P     F L+ + L++  +V ++ +Y
Sbjct: 71  -RYLVNTVLLVTMVLAGQLVLCTLAAYAFAKYDFPGKGILFALVLMQLMIMPDVLVVENY 129

Query: 131 EVVSNLGMLNSYTGLVLPLIASATATFFFRQFFKTIPDELLEAAQLDNAGPIRFFIDILF 190
             +S +G+L+S   + LP +ASA   F  RQ FK+IP EL EAA ++ A  ++    +  
Sbjct: 130 RTMSAIGVLDSTLAIGLPYMASAFGIFLLRQTFKSIPKELDEAAAVEGASTLQILWKVYV 189

Query: 191 PLSKTMMAAIFIIMFVVGWNQYLWPIMMTTDEQYNTIVMGIKQILNNINETSLPRYDYAF 250
           PL K +  A  ++     WN +LWP+++T       + +G+ Q+ ++  +     +    
Sbjct: 190 PLGKPVYLAYALVSVSYHWNNFLWPLIVTNTTNSRPLTVGL-QVFSSTEQG--VDWSIIT 246

Query: 251 AMVILAMLPPVLVVVIFQRWFVKGLVES 278
           A  ++   P ++  ++FQR FV+  + +
Sbjct: 247 AATLMTSGPLLIGFLLFQRQFVQSFMRA 274