Pairwise Alignments

Query, 280 a.a., sn-glycerol-3-phosphate ABC transporter permease UgpE from Vibrio cholerae E7946 ATCC 55056

Subject, 289 a.a., sugar ABC transporter, permease protein from Marinobacter adhaerens HP15

 Score =  107 bits (266), Expect = 4e-28
 Identities = 67/276 (24%), Positives = 134/276 (48%), Gaps = 5/276 (1%)

Query: 2   KSNRLSDHLILIAGALFMLVPLWLIFASSTHQPNTIVSEGLQWTLGDNLSAVYREAWNKS 61
           + +R++ + +L+  AL  L+PL+++  +S   P  I +  L     D  +  + +AW+++
Sbjct: 10  RPSRVAIYGLLLLAALVYLIPLFIMLVTSFKTPMDIRTGNLMALPTDWTTIGWTKAWSEA 69

Query: 62  LGFAGNVTAQTMIVNSMIMGLGFAIGKIVISMMAAYALVYFRLPYASAWFWLIFITLLLP 121
                         NS  M +   +   ++     Y L  ++   +  +F ++     +P
Sbjct: 70  CTGVQCEGISGYFWNSFKMTVPAVLISTLLGAFNGYVLSKWKFKGSDLFFGMLLFGCFVP 129

Query: 122 LEVRIIPSYEVVSNLGMLNSYTGLVLPLIASATA--TFFFRQFFKTIPDELLEAAQLDNA 179
            +V ++P    +  LG+ N+ +GLVL  +    A  T FFR ++  IPD L++AA+LD A
Sbjct: 130 FQVVLLPMAATLGKLGLANTTSGLVLVHVIYGVAFTTLFFRNYYVAIPDALIKAARLDGA 189

Query: 180 GPIRFFIDILFPLSKTMMAAIFIIMFVVGWNQYLWPIMMTTDEQYNTIVMGIKQILNNIN 239
           G    F  IL P+S  +     I  F   WN +L+ ++  + +    I + +  ++N   
Sbjct: 190 GFFTIFFRILLPMSTPIFMVSLIWQFTQIWNDFLFGVVFASGDS-QPITVALNNLVN--T 246

Query: 240 ETSLPRYDYAFAMVILAMLPPVLVVVIFQRWFVKGL 275
            T +  Y+   A  ++A LP ++V ++  ++F++GL
Sbjct: 247 STGVKEYNVDMAAAMIAALPTLVVYIVAGKYFIRGL 282