Pairwise Alignments

Query, 280 a.a., sn-glycerol-3-phosphate ABC transporter permease UgpE from Vibrio cholerae E7946 ATCC 55056

Subject, 285 a.a., sugar ABC transporter permease from Burkholderia phytofirmans PsJN

 Score =  107 bits (266), Expect = 4e-28
 Identities = 80/284 (28%), Positives = 135/284 (47%), Gaps = 19/284 (6%)

Query: 1   MKSNRLSDHLILIAGALFMLVPLWLIFASSTH-----QPNTIVSEGLQWTLGDNLSAVYR 55
           M  +R   +  L   AL+ L PL+++ ++S       +   +++    WT+       + 
Sbjct: 5   MTISRAVIYAALFLFALYFLFPLYVMLSTSFKDIDQLRTGNLLTPPTHWTIDP-----WI 59

Query: 56  EAWNKSLGFAGNVTAQTMIVNSMIMGLGFAIGKIVISMMAAYALVYFRLPYASAWFWLIF 115
           +AW+ +         Q   +NS+ M +   +   +I     Y L ++R   A   F +I 
Sbjct: 60  KAWSGACTGVRCDGMQPFFMNSVRMVIPAVLISSIIGAFNGYVLTHWRFRGADPIFTMIL 119

Query: 116 ITLLLPLEVRIIPSYEVVSNLGMLNSYTGLVLP--LIASATATFFFRQFFKTIPDELLEA 173
           +   +P +  ++P       LG+ N+ TGLV+   +   A  T FFR F+ +IP EL++A
Sbjct: 120 VGCFIPFQAILLPMARFEGFLGLSNTTTGLVVVHVIYGIAFTTMFFRNFYVSIPAELVKA 179

Query: 174 AQLDNAGPIRFFIDILFPLSKTMMAAIFIIMFVVGWNQYLWPIMMTTDEQYNTIVMGIKQ 233
           A++D AG    F  IL P+S  +     I  F   WN +L+ I+ +  +      M I  
Sbjct: 180 ARIDGAGFFTIFTKILLPVSLPIFMVCLIWQFTQIWNDFLFGIVFSGVDS-----MPITV 234

Query: 234 ILNNINETS--LPRYDYAFAMVILAMLPPVLVVVIFQRWFVKGL 275
            LNN+  TS  +  Y+   A  I+A LP +LV +I  R+FV+GL
Sbjct: 235 ALNNLVNTSTGVKEYNVDMAGAIIAALPTLLVYIIAGRYFVRGL 278