Pairwise Alignments

Query, 293 a.a., glycerol-3-phosphate transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 337 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  116 bits (291), Expect = 6e-31
 Identities = 87/284 (30%), Positives = 142/284 (50%), Gaps = 10/284 (3%)

Query: 4   RQHFAHTPLPYLLLAPQIVIIAVFFIYPAAQAIYLSFMLEDPWGLSSTFVWF--ENYQVL 61
           RQH+    L YLLL P + ++A+  +YP   ++ LSF       LS+    F  ENY  L
Sbjct: 49  RQHW----LGYLLLLPAVALVALIIVYPLFVSLDLSFQKIGMATLSAPRKPFTLENYHKL 104

Query: 62  FSSTDYLDSLGFTLLFSVIVSFLSLALALLLAVKADNIIHGQGSYRVTLTWVYAVAPAVA 121
           F+S D+ +S   T+   V+VS    A+ L  A+  +N   G+   R+ +   +AV   +A
Sbjct: 105 FASPDFWNSCWVTIKLVVVVSAACFAVGLGTALLVNNRFKGRTLARLFVALPWAVPEVIA 164

Query: 122 GIIGGFLFNPHIGVLTDFFQYIG---WQFSFQTDPVDATIALILVSVWKQVSVNFLYFLA 178
            +I  ++F+   G++   F  +G      ++ ++P  A   + +  +WK      +  LA
Sbjct: 165 VVIFAWIFDSSFGLMNWLFIKLGITSQMINWFSEPTAAFWVVAITMIWKGYPFVSIMTLA 224

Query: 179 GLQSISYAVREAALLDCQSDSKRFWSITFPLLAPTGFFLLVINLTYAFFDTFGVIDTMTN 238
           GLQSI      AA +D  +  +RFW IT P+L P      V+ + + F D F +I  +T+
Sbjct: 225 GLQSIPEDFYNAAKVDGANAFQRFWYITIPVLMPVLGVTSVLVVLWVFRD-FSIIKVLTD 283

Query: 239 GGPGGSTTSLVYKVYRDGFVGADLGGSSAQSVVLLVLVLALTWL 282
           GGP  +T +L    Y   F   ++G +SA  +V LVL +  + L
Sbjct: 284 GGPLKATQTLSIMTYDQAFGFFNMGYASAIGIVTLVLCVVASLL 327