Pairwise Alignments

Query, 293 a.a., glycerol-3-phosphate transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., ABC transporter for L-Fucose, permease component 1 (from data) from Sinorhizobium meliloti 1021

 Score =  102 bits (254), Expect = 1e-26
 Identities = 76/281 (27%), Positives = 133/281 (47%), Gaps = 12/281 (4%)

Query: 13  PYLLLAPQIVIIAVFFIYPAAQAIYLSFMLEDPWGLSS-----TFVWFENYQVLFSSTDY 67
           P LLL P  +++AVF + P   ++Y SF    P+ L+       F+ F NY  + ++ ++
Sbjct: 9   PTLLLLPAFIVLAVFIVLPLIFSLYSSFT---PFRLTKPDSLWVFIGFRNYVNVLTNAEF 65

Query: 68  LDSLGFTLLFSVIVSFLSLALALLLAVKADNIIHGQGSYRVTLTWVYAVAPAVAGIIGGF 127
             + G T+L   +     + L L LA+  +   +GQ + R  + +    +P + G    F
Sbjct: 66  WVAFGRTVLLLTVALNAEMFLGLGLALLVNKATYGQRALRTAMMFPMMFSPVLVGFQFKF 125

Query: 128 LFNPHIGVLTDFFQYIGWQFSFQTDPVDATIAL---ILVSVWKQVSVNFLYFLAGLQSIS 184
           LFN +IG + +  Q +G         +D  +AL   I+  VW   +V  +  LAGL ++ 
Sbjct: 126 LFNDNIGFVNNALQSLGLTDRAIPWLIDGNLALFSIIVAEVWSSTAVFAILILAGLLAMP 185

Query: 185 YAVREAALLDCQSDSKRFWSITFPLLAPTGFFLLVINLTYAFFDTFGVIDTMTNGGPGGS 244
               EAA +D  +  + F  +T+P L P  F  + I  +      + ++  MT+GGP   
Sbjct: 186 KDPVEAAHVDGCTPWQTFRYVTWPYLMPFAFIAMTIR-SLDVARAYDIVKIMTDGGPAKR 244

Query: 245 TTSLVYKVYRDGFVGADLGGSSAQSVVLLVLVLALTWLQFR 285
           T  L   + R  +  A +G ++A + V ++L +  T   FR
Sbjct: 245 TELLWTLIGRTAYGDARMGMANAMAYVAILLSIFFTVYFFR 285