Pairwise Alignments

Query, 293 a.a., glycerol-3-phosphate transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 311 a.a., sugar ABC transporter permease from Herbaspirillum seropedicae SmR1

 Score = 90.5 bits (223), Expect = 4e-23
 Identities = 72/273 (26%), Positives = 126/273 (46%), Gaps = 8/273 (2%)

Query: 14  YLLLAPQIVIIAVFFIYPAAQAIYLSFMLEDPWGLSST-FVWFENYQVLFSSTDYLDSLG 72
           +  LAP  V+  V+ +YP    IYLSF   D  G++   FV   NY  LF +  +  +L 
Sbjct: 39  FWFLAPACVMTLVYVLYPILYTIYLSFFSWD--GMTEPRFVGLANYVELFHAPTFYTALK 96

Query: 73  FTLLFSVIVSFLSLALALLLAVKADNIIHGQGSYRVTLTWVYAVAPAVAGIIGGFLFNPH 132
             +L+ +++  L+  + L +A+  +  + G    +      + ++  V G++  + ++P 
Sbjct: 97  NNVLW-LLMFLLAPPMGLAIALYLNQKVIGMRVVKSLFFAPFVLSGVVVGLMYSWFYDPS 155

Query: 133 IGVLTDFFQYIGWQFSFQTDPVDATIALILVSVWKQVSVNFLYFLAGLQSISYAVREAAL 192
            G+L+  F   G       D   AT  +I  ++W Q +   + FL GL ++++   EAA 
Sbjct: 156 FGLLSLLF---GQGVPVLGDARYATFGIIFAALWPQTAYCMILFLTGLTALNHDQVEAAR 212

Query: 193 LDCQSDSKRFWSITFPLLAPTGFFLLVINLTYAFFDTFGVIDTMTNGGPGGSTTSLVYKV 252
           ++          +  P L  T F   V+++  A   +F +I  MT+GGP  S+T L Y  
Sbjct: 213 MEGAKGWTMLRYVILPQLRSTTFMAFVVSIIGAL-RSFDLISVMTSGGPYESSTVLAYYA 271

Query: 253 YRDGFVGADLGGSSAQSVVLLVLVLALTWLQFR 285
           Y         G S+A +V L  ++L     Q R
Sbjct: 272 YDQAIKYYRQGYSAAVAVTLFAIMLVYIVYQLR 304