Pairwise Alignments

Query, 434 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 404 a.a., Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3) from Acidovorax sp. GW101-3H11

 Score =  279 bits (713), Expect = 1e-79
 Identities = 151/402 (37%), Positives = 221/402 (54%), Gaps = 5/402 (1%)

Query: 34  MGGQLGETVNQLATDFNASQSDYKLTPVYKGSYTETLTAGIAAFRAGQAPNILQVFDAGA 93
           M   LGE VN LA  +NASQ+ YK+ P YKG+Y E++T  IAAFRAG AP+ILQVF+ G 
Sbjct: 1   MSAALGEWVNDLAKQYNASQTKYKVVPTYKGTYDESMTGAIAAFRAGNAPHILQVFEVGT 60

Query: 94  ATIMSSKGVAKPVQDLMIESGYPFTAQDYIAGVRNFYADNTGKMVGMPFNSSTPVLYYNK 153
           AT+M+SKG   P   ++ + G+ F    Y++ V  +Y    G+M+  P NSST + YYNK
Sbjct: 61  ATMMASKGAIVPAAKVLNDGGFKFEPTQYVSAVAGYYTAPNGQMLSYPLNSSTTIFYYNK 120

Query: 154 DMLASVNAQA---PQTYEQLEQVAAKLAEKGQA-GFAQSLTPWIMFENFKSRHNLPLSDK 209
           D        A   P+T+ ++   A+KL   G +  F  S   W   E+F   HN   + K
Sbjct: 121 DAFKKAGLDADKPPKTWPEVFAAASKLKASGHSCPFTTSWISWTQLESFSLWHNTLFATK 180

Query: 210 QNGYQDLSTKIMFNSDDMLMHVKKLKEWSDKGYYKYYGSDWDANQTPFERGEVAMWMGSS 269
            NG+     ++  N+   + H + L + S +G + Y G   +     F  GE AM  GSS
Sbjct: 181 NNGFDGNDAQLQINTPLHVRHFENLAKASKEGSFVYKGRG-NVPDASFPSGECAMITGSS 239

Query: 270 GSFGGLRNRVKFNLGTTYLPYWESVTKNPTHTFIGGAALFALQGHTPAQDKGVAAFFAYL 329
           G +  +    KF  G + LPY+  V   P +T IGGA+L+ + G    + KGVA F  +L
Sbjct: 240 GLYARVAKEAKFAYGISTLPYYSDVQGAPQNTAIGGASLWVMSGKKSEEYKGVADFLNFL 299

Query: 330 TKPETQMNWHKTTGYVPVTNAAYDLTKQSGYYQENPDAEVGVKQLSLPDGEWTKGYRLGY 389
              + Q   H+ TGY+PVT  AY LT+ SG+Y +NP  +V V Q+     E ++G RLG 
Sbjct: 300 NDTKVQAASHQRTGYLPVTMGAYQLTEASGFYTKNPGTDVAVTQMIKKATEKSRGIRLGN 359

Query: 390 YPQVREVMHREFDNIFSGRSTVESSLNKVEDESAKLLNRFAR 431
           + Q+R ++  E + I+SG+ + + +L+       + L RFAR
Sbjct: 360 FVQIRSIIDEETEQIWSGKKSPKEALDTAVTRGNEQLARFAR 401