Pairwise Alignments

Query, 434 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 420 a.a., sugar uptake ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score = 52.4 bits (124), Expect = 3e-11
 Identities = 68/307 (22%), Positives = 112/307 (36%), Gaps = 50/307 (16%)

Query: 3   KVWLTGLLTATASGVFSASTLAATEITWWHAMGGQLGETVNQLATDFNASQSDYKLTPVY 62
           K+ L G L    S V  A T    +ITWW  + G  G  +  L  +FN +  D ++    
Sbjct: 6   KLALAGALAILPSAVAHAQT----DITWWDFLSGGDGVRMKALIKEFNDTHPDIRINATT 61

Query: 63  KGSYTETLTAGIAAFRAGQAPNILQVFDAGAATIMSSKGVAKPVQDLMIESGYPFTAQDY 122
                   +    A   GQ P+I+  +      +    GV +P+    +E+      ++Y
Sbjct: 62  LEWGVPFYSKVQTAAAVGQQPDIM-TYHLSRFPLAIPSGVLRPLAPEELEAA-GIKKENY 119

Query: 123 IAGVRNFYADNTGKMVGMPFNSSTPVLYYNKDMLASVNAQA----PQTYEQLEQVAA--- 175
           +    N      GK  G+PF+  + VLYYNK++L           P+  + L+   A   
Sbjct: 120 VEASWN---SGDGKTYGVPFDVHSVVLYYNKNILKEAGLLGDDGLPKGLDGLDNFNAALE 176

Query: 176 KLAEKGQAGFAQSL------TPWIMFENFKSRHNLPLSDKQ------------------- 210
           K+   G+  +  SL      + W +F    S+      + +                   
Sbjct: 177 KIKTTGKVQYPLSLHTDEGGSMWRVFYTLLSQQGAKFIEGEEILPGEAGVKALTSMANWV 236

Query: 211 -NGYQDL-----STKIMFNSDDMLMHVKKLKE---WSDKGYYKYYGSDWDANQTPFERGE 261
            +GY        ++  +F S    MH+  + E     D       G +W A Q P   G+
Sbjct: 237 SSGYSPQLISYEASIALFTSGKAAMHINGVWEVPTMVDLEKNNNLGFEWGAIQIPVLMGQ 296

Query: 262 VAMWMGS 268
            A W  S
Sbjct: 297 PATWADS 303