Pairwise Alignments

Query, 434 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 410 a.a., sugar uptake ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score = 47.8 bits (112), Expect = 6e-10
 Identities = 79/328 (24%), Positives = 132/328 (40%), Gaps = 54/328 (16%)

Query: 3   KVWLTGLLTATASGVFSASTLAATEI----TWWHAMGGQLGETV---NQLATDFNASQSD 55
           K  + G L A +  V  A+T  A E+    TW        GE++     +A  F      
Sbjct: 5   KTTIIGALLALS--VAGAATARAEEVLRFATW------DTGESLAIQQAIAKKFEEKHPG 56

Query: 56  YKL-TPVYKGSYTETLTAGIAAFRAGQAPNILQV--FDAGAATIMSSKGVAKPVQDLMIE 112
            K+    Y   Y + L   +AAF AG  P+++ +  F     ++M       P+ +L+  
Sbjct: 57  VKVQVEPYAEGYDQKL---VAAFGAGNPPDVMYMWNFPQYYTSLM-------PLDELIAR 106

Query: 113 SGYPFTAQDYIAGVRNFYADNTGKMVGMPFNSSTPVLYYNKDMLASVNAQAPQ---TYEQ 169
                   D+  G+ N      GK  GMP   +T V++YNK+M A    + P+   T++ 
Sbjct: 107 DSAEIKPDDFPEGLMNTTRIE-GKTYGMPSGFTTQVVFYNKEMFAKAGVEEPKEGWTWDD 165

Query: 170 LEQVAAKLAEKGQA--GFAQSLTP-WIMFENFK-SRHNLPLSD---KQNGY--QDLSTKI 220
           L   AAK  ++     GFA    P    FE F  S     +SD   + +GY   D +  +
Sbjct: 166 LRAKAAKFRDEAGKVYGFAVDAKPDPYDFEQFLWSNGTKYISDDGKEIDGYMNSDAAAAV 225

Query: 221 MFNSDDMLMHVKKLKEWSDKGYYKYYGSDWDANQTPFERGEVAMWMGSSGSFGGLRNRVK 280
           +    DM    + +           +  D     T F+ G++AM+  +      + +   
Sbjct: 226 LGMFADMARKEEAV---------TLHLGDETGGDTLFQGGKIAMFQSAMWDKADI-DAAG 275

Query: 281 FNLGTTYLPYWESVTKNPTHTFIGGAAL 308
           F+ G   LP   +    P H+ +G +A+
Sbjct: 276 FSYGVAPLP---TFGDRPAHSALGVSAI 300