Pairwise Alignments

Query, 434 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., ABC transporter substrate-binding protein from Rahnella sp. WP5

 Score =  134 bits (336), Expect = 7e-36
 Identities = 116/433 (26%), Positives = 196/433 (45%), Gaps = 29/433 (6%)

Query: 7   TGLLTATASGVFSASTLAATEITWWHAMGGQLGETVNQLATDFNASQSDYKLTPVYKGSY 66
           T +L  + +  F+A  +   ++ +  A+GG++  TV+ L  DF  +  D  + PVY G Y
Sbjct: 12  TAVLLISCTSAFAADPVKL-QMYYPIAVGGKISHTVDTLVEDFQKTHPDISIQPVYTGDY 70

Query: 67  TETLTAGIAAFRAGQAPNILQVFDAGAATIMSSKGVAKPVQDLMIES-GYPFTAQDYIAG 125
             T+T  + AFR G AP I  + D  A +++ + G   PV DL  ++ G  +    Y A 
Sbjct: 71  ATTVTKALTAFRGGNAPQIAVIGDIEAYSLIDA-GAILPVSDLANDADGKKWIDGFYPAF 129

Query: 126 VRNFYADNTGKMVGMPFNSSTPVLYYNKDML--ASVNAQA-PQTYEQLEQVAAKL----- 177
           +R+      GK+  +PF  ST VLY+NK     A +N    P +++Q+     KL     
Sbjct: 130 IRHI----QGKVWSIPFQRSTVVLYWNKQAFEKAGLNGDTPPASWQQVVDFGKKLVVRDG 185

Query: 178 AEKGQAGFAQSLTPWIMFENFKSRHNLPLSDKQNGYQDLSTKIMFNSDDMLMHVKKLKEW 237
           +E  Q G     TP   + NF+       S   NG     T + F++   +  ++ L + 
Sbjct: 186 SEVKQWGIEIPSTP-NGYWNFQGIAATNGSHLDNG---KGTAVTFDTPANVEALQWLTDL 241

Query: 238 SDKGYYKYYGS-DWDANQTPFERGEVAMWMGSSGSFGGLRNRVKFNLGTTYLPYWESVTK 296
           S K      G+  W      F  G+ AM + ++G+   +R   KF  G   LP  ++   
Sbjct: 242 SQKEAVSPKGTIAWGTTPQDFIDGKTAMMVTTTGNLTTVRENAKFPFGVAMLPE-KTQRG 300

Query: 297 NPTHTFIGGAALFALQGHTPAQDKGVAAFFAYLTKPETQMNWHKTTGYVPVTNAAYDLTK 356
           +PT    GG  L+  +  TP Q K    F  +++ PE    W   TGYV  + AA++   
Sbjct: 301 SPT----GGGNLYVFKNTTPEQQKAALEFIRWVSAPEQAARWSIATGYVATSPAAWETPV 356

Query: 357 QSGYYQENPDAEVGVKQLSLPDGEWTKGYRLGYYPQVREVMHREFDNIFSGRSTVESSLN 416
              Y ++ P A V  +QL     E +    +    Q++E+M+   +   +   T   +L+
Sbjct: 357 MQDYVKQVPQALVAREQLKYSQPELSTYNSV----QIQELMNHAIEAAVTQAKTPADALS 412

Query: 417 KVEDESAKLLNRF 429
             + ++ +LL  +
Sbjct: 413 SAQKQADRLLKPY 425