Pairwise Alignments

Query, 434 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 433 a.a., sn-glycerol-3-phosphate-binding periplasmic protein ugpB from Phaeobacter inhibens DSM 17395

 Score =  506 bits (1304), Expect = e-148
 Identities = 237/425 (55%), Positives = 310/425 (72%), Gaps = 3/425 (0%)

Query: 11  TATASGVFSASTL-AATEITWWHAMGGQLGETVNQLATDFNASQSDYKLTPVYKGSYTET 69
           T  A+  F+A+   A TEITWWHAMGG LG+TVNQ+A+DFNASQ +YK+TPV+KG+Y ET
Sbjct: 7   TTAATLAFAANAAYAETEITWWHAMGGALGDTVNQIASDFNASQDEYKITPVFKGTYEET 66

Query: 70  LTAGIAAFRAGQAPNILQVFDAGAATIMSSKGVAKPVQDLMIESGYPFTAQDYIAGVRNF 129
           LTAGIAAFRAG+ PN++QVFDAGAAT++ +KG   PVQDL+ ++G  F   DYIAGVR F
Sbjct: 67  LTAGIAAFRAGEQPNVMQVFDAGAATVIGAKGATIPVQDLLADNGVDFDINDYIAGVRYF 126

Query: 130 YADNTGKMVGMPFNSSTPVLYYNKDMLASVNAQAPQTYEQLEQVAA-KLAEKGQAGFAQS 188
           YAD+ GKM+GMPFNSSTP++YYN   L      AP+T+E+ + V A  L E G    +QS
Sbjct: 127 YADSDGKMIGMPFNSSTPIMYYNIQALEKAGVTAPKTWEEFQTVTAPALKEAGYTALSQS 186

Query: 189 LTPWIMFENFKSRHNLPLSDKQNGYQDLSTKIMFNSDDMLMHVKKLKEWSDKGYYKYYGS 248
             PWI  ENF SRHNLP +   NGY  + T+I+ N+D +  H   + +W +KG+++++G+
Sbjct: 187 HLPWIFTENFHSRHNLPFATNNNGYDSVDTQILVNNDAIKAHFTAVTDWQEKGHFEWFGT 246

Query: 249 DWDANQTPFERGEVAMWMGSSGSFGGL-RNRVKFNLGTTYLPYWESVTKNPTHTFIGGAA 307
            W  NQTPFE G+VAMW+GSSGSFGGL +  + F+   T LPYWE VTK PT TFIGGA+
Sbjct: 247 GWGDNQTPFEEGKVAMWLGSSGSFGGLSKKNLPFDFSATMLPYWEGVTKEPTQTFIGGAS 306

Query: 308 LFALQGHTPAQDKGVAAFFAYLTKPETQMNWHKTTGYVPVTNAAYDLTKQSGYYQENPDA 367
           LFA+ GH   ++K  AAFF +LT  E Q  WHK TGYVP+T AAY++ K  G+Y   P A
Sbjct: 307 LFAMAGHDAEENKATAAFFDFLTSSEVQYFWHKETGYVPITEAAYEMAKADGHYDRAPAA 366

Query: 368 EVGVKQLSLPDGEWTKGYRLGYYPQVREVMHREFDNIFSGRSTVESSLNKVEDESAKLLN 427
           EVG++QLSLP G+ TKGYR+G+Y Q+R+VM+RE+  I +G ++VE + N +E E+  LL 
Sbjct: 367 EVGIQQLSLPGGDNTKGYRMGFYVQIRDVMNREYGRILTGETSVEDAFNAIEAEANNLLA 426

Query: 428 RFART 432
           RFA+T
Sbjct: 427 RFAKT 431