Pairwise Alignments

Query, 434 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 454 a.a., ABC-type sugar transport system, periplasmic component from Dechlorosoma suillum PS

 Score =  116 bits (290), Expect = 2e-30
 Identities = 102/425 (24%), Positives = 182/425 (42%), Gaps = 31/425 (7%)

Query: 12  ATASGVFSASTLAATEITWWHAMGGQLGETVNQLATDFNASQSDYKLTPVYKGSYTETLT 71
           A A+   +A+     E+T  H +       + ++   FN  Q  YK+  V++        
Sbjct: 33  APAAPAKTAAPQEPVELTLSHQLEESRTSRLQEVVDRFNGQQKAYKVVLVHRQG------ 86

Query: 72  AGIAAFRAGQAPNILQVFDAGAATIMSSKGVAKPVQDLMIESGYPFTAQDYIAGVRNFYA 131
                  AG     L + D   +  +S K   + +  ++ ES            +R+   
Sbjct: 87  ------GAGNYHMNLALRDE-LSHFVSGKEPYRALHQVISESKEKIDTARLAPELRSGVT 139

Query: 132 DNTGKMVGMPFNSSTPVLYYNKDML--ASVNAQAP-QTYEQLEQVAAKLAEKG-QAGFAQ 187
           D  G+++G+P   STPVL+Y+K     A ++ +AP +T+ +L+ VA KL + G +  +  
Sbjct: 140 DGKGRLLGLPMAYSTPVLFYSKSAFRRAGLDPEAPPKTWWELQAVAGKLFDAGIKCPYTT 199

Query: 188 SLTPWIMFENFKSRHNLPLSDKQNGYQDLSTKIMFNSDDMLMHVKKLKEWSDKGYYKYYG 247
           S   W+  +N  +R+N+    ++        ++ FN    + HV  L  W    Y+  +G
Sbjct: 200 SRPAWVHIDNLAARNNVETVGEKG-------EMAFNGMMQVKHVALLNSWYKARYFHTFG 252

Query: 248 SDWDANQTPFERGEVAMWMGSSGSFGGLRNRVKFNLGTTYLPYWESVTKNPTHTFIGGAA 307
              +A+   F  GE  M   +S  F   R     ++G   LPY++     P      GA+
Sbjct: 253 GQNEAD-AHFASGECGMITTASDRFVTFRENKDLDVGVAPLPYYDDAYGAPRQALADGAS 311

Query: 308 LFALQGHTPAQDKGVAAFFAYLTKPETQMNWHKTTGYVPVTNAAYDLTKQSGYYQENPDA 367
           L+   GH  A+ KGVA F  +L  P+ Q+   ++ GY+P+T AA    K      +  + 
Sbjct: 312 LWVGPGHKAAEYKGVAKFVGFLMAPDMQVEIARSGGYLPLTAAAQAAAKGKLLKDDMRNI 371

Query: 368 EVGVKQLS--LPDGEWTKGYRL----GYYPQVREVMHREFDNIFSGRSTVESSLNKVEDE 421
           +V   QL   LP    +K   L         VR ++  E + ++S +   + +L+     
Sbjct: 372 DVAQAQLGPVLPRTSVSKAAALTPVVSAINPVRLIIDEELEQVWSNKKPAKLALDNAVSR 431

Query: 422 SAKLL 426
           +  +L
Sbjct: 432 ANAVL 436