Pairwise Alignments

Query, 434 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 436 a.a., Probable Sn-glycerol-3-phosphate-binding lipoprotein UgpB from Mycobacterium tuberculosis H37Rv

 Score = 67.4 bits (163), Expect = 8e-16
 Identities = 85/351 (24%), Positives = 134/351 (38%), Gaps = 18/351 (5%)

Query: 28  ITWWHAMGGQLGETVNQLATDFNASQSDYKLTPVYKGS-YTETLTAGIAAFRAGQAPNIL 86
           I +W +  GQ      +L   F        +  +  G  Y E      AA      P+++
Sbjct: 39  IDFWSSHPGQSSAAERELIGRFQDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVV 98

Query: 87  QVFDAGAATIMSSKGVAKPVQDLMIESGYPFTAQDYIAGVRNFYADNTGKMVGMPFNSST 146
            + D        S GV   + DL  + G   T  DY+  +   Y  N G+   +P+  ST
Sbjct: 99  LLDDRWWFHFALS-GVLTALDDLFGQVGVDTT--DYVDSLLADYEFN-GRHYAVPYARST 154

Query: 147 PVLYYNKD--MLASVNAQAPQTYEQLEQVAAKLAEKGQAGFAQSLTPWIMFENFKSRHNL 204
           P+ YYNK     A +  + PQ++ + ++   +L     AG  +S   W   +        
Sbjct: 155 PLFYYNKAAWQQAGLPDRGPQSWSEFDEWGPELQRVVGAG--RSAHGWANADLISWTFQG 212

Query: 205 PLSDKQNGYQDLSTKIMFNSDDMLMHVKKLKEWSDKGYYKYYGSDWDANQTPFERGEVAM 264
           P       Y D  T  +     +            KGY         AN+  F  G +A 
Sbjct: 213 PNWAFGGAYSDKWTLTLTEPATIAAGNFYRNSIHGKGYAAVANDI--ANE--FATGILAS 268

Query: 265 WMGSSGSFGGLRNRVKFNLGTTYLPYW-ESVTKNPTHTFIGGAALFALQGHTPAQDKGVA 323
            + S+GS  G+    +F+ G   LP   ++    PT    GGA L      +  +     
Sbjct: 269 AVASTGSLAGITASARFDFGAAPLPTGPDAAPACPT----GGAGLAIPAKLSEERKVNAL 324

Query: 324 AFFAYLTKPETQMNWHKTTGYVPVTNAAYDLTKQSGYYQENPDAEVGVKQL 374
            F A++T P     + + TGY+PV  +A D   +  Y  +NP A V + QL
Sbjct: 325 KFIAFVTNPTNTAYFSQQTGYLPVRKSAVDDASERHYLADNPRARVALDQL 375